Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1908 ATGGAGGAAGGGCAAGTTAGTCTGATCAAAGAGCTAAACCAAGGGAAGGAGCTTGCTGGGTTGCTCTGTAGCCATATTGAATCTTCTTCTCATCAGACCAACGAGTTCTTGATTGAGAAAATACTCTCTTCTTATGAGAAAGCACTTAACTTGCTCACACGTTCACAAAATGTGATGGAGCCTAATAATCCCACCATTAATGCTCATCATCATGGGAGCCCCAGATTTGAGGAAGATAATCCCAGAGATGTCAACAAGAAAAGAAAGAGCATGACCAGATGGACAAAGCAAGTGAAGGTTTGTTCAAGAACAGGTATTGAAGGTTCATTGGATGATGGATATAGTTGGAGAAAATATGGCCAGAAGGATATTCTCGGAGCTAAATTTCCTAGAGGATACTACAGATGCACTCATAGATTTTTACAAGGTTGTCAGGCAACAAAACAAGTTCAAAGGTCTGATGAAGATCCAACAATATTCGAAGTGACCTACAGAGGAAGACATACCTGTAACAAACAGGCAGTATCATCAAAGAAAAAGATGGGTTTTGGAGAAAACAATCATAATCATCAAAACCAATCACAAGAGGAAGAAGAAGAAAAGATGGAACAATCCTTAGTGACATTCTTCACTTTTGAACCAGAACTTGAAGTCAAAATGGAGGATATTTTCCCAACATCTACTGGATTTCCTTCAACATCTGATAATAATAACCAGTTCGTGGAAAACTTATCTGTTGATTTCATTTCCCCATCAACCTCGGAATCGAACCTTTTTGGTCTGTCGCCCTGTCACATGGGAAGTGGAGGATTTGGCCAAAACGCGCGAAGTTCAGAATCTGAAGTGACTGACATAGTTTCAGCCCCAACCTCAGTCACCAATTCGCCTTTGCTAGATTTGGATGTCCTGTTTAATCAGCAAGATTTTCAATCCGATTTCCCTTTCAACACTTTTGAATTTTTCTCTTCTTAG 972 0.3992 MEEGQVSLIKELNQGKELAGLLCSHIESSSHQTNEFLIEKILSSYEKALNLLTRSQNVMEPNNPTINAHHHGSPRFEEDNPRDVNKKRKSMTRWTKQVKVCSRTGIEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTHRFLQGCQATKQVQRSDEDPTIFEVTYRGRHTCNKQAVSSKKKMGFGENNHNHQNQSQEEEEEKMEQSLVTFFTFEPELEVKMEDIFPTSTGFPSTSDNNNQFVENLSVDFISPSTSESNLFGLSPCHMGSGGFGQNARSSESEVTDIVSAPTSVTNSPLLDLDVLFNQQDFQSDFPFNTFEFFSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1908 323 Gene3D WRKY domain 95 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco09g1908 323 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 241 IPR044810 GO:0003700
Acco09g1908 323 ProSiteProfiles WRKY domain profile. 105 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g1908 323 FunFam WRKY transcription factor 53 96 173 - -
Acco09g1908 323 SMART WRKY_cls 110 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g1908 323 MobiDBLite consensus disorder prediction 177 200 - -
Acco09g1908 323 MobiDBLite consensus disorder prediction 71 90 - -
Acco09g1908 323 Pfam WRKY DNA -binding domain 111 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco09g1908 323 MobiDBLite consensus disorder prediction 61 90 - -
Acco09g1908 323 Coils Coil 185 205 - -
Acco09g1908 323 SUPERFAMILY WRKY DNA-binding domain 109 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1908 Acco-ChrAcco09 36002354 36003913 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1908 28 174 WRKY Transcription Factor Family AT5G24110 48.322 2.08e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco09g1908 WRKY 1.2e-27 CL0274