Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1907 ATGGACAAACAGCGAGGAAGGCAGTTCATGATTACTACCTCCAACCATGAAAAAGAGGTGACCAGTATCGAGTGGGAGTTCATAAACATGTCTGATGAAGAAGAAGATCTCATCCACAGAATGTACAAACTCGTTGGAGACCGATGGGATCTGATAGCTGGTAGAATCCCAGGTCGAAAAGCCGAAGAAATTGAGAGATTTTGGATTATGAAGCACGCGCAGGTGTTTTTCCTTCAATGA 240 0.4375 MDKQRGRQFMITTSNHEKEVTSIEWEFINMSDEEEDLIHRMYKLVGDRWDLIAGRIPGRKAEEIERFWIMKHAQVFFLQ 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1907 79 Gene3D - 31 72 - -
Acco09g1907 79 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 29 70 - -
Acco09g1907 79 CDD SANT 29 68 IPR001005 -
Acco09g1907 79 FunFam MYB-like transcription factor 29 71 - -
Acco09g1907 79 SUPERFAMILY Homeodomain-like 31 71 IPR009057 -
Acco09g1907 79 Pfam Myb-like DNA-binding domain 30 69 IPR001005 -
Acco09g1907 79 SMART sant 26 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1907 Acco-ChrAcco09 35980347 35982993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1907 29 68 MYB Transcription Factor Family AT5G52600 57.500 2.71e-12 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1907 Myb_DNA-binding 2.6e-06 CL0123