Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1906 ATGGACAAACAGCGAAGAAAAAGGCAGTTCAAGACTACTACCACTGACTTTGATGAAGAGGTGAGCAGTATCGAGTGGGATTTCATAAACATGTCAGAGGAGGAGGAAGATCTTATCCACAGAATGTACAAACTCGTTGGAGACAGATGGGGTCTGATAGCTGGTAGAATCCCAGGTCGAAAAGCCGAAGAAATTGAGAGATTTTGGATTATGAAGCATGGGCTAGTGTTTGCGAGCAGAAGAGAAAAACTTGGCGGATATTAA 264 0.4318 MDKQRRKRQFKTTTTDFDEEVSSIEWDFINMSEEEEDLIHRMYKLVGDRWGLIAGRIPGRKAEEIERFWIMKHGLVFASRREKLGGY 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1906 87 SUPERFAMILY Homeodomain-like 32 70 IPR009057 -
Acco09g1906 87 Pfam Myb-like DNA-binding domain 31 70 IPR001005 -
Acco09g1906 87 CDD SANT 30 69 IPR001005 -
Acco09g1906 87 SMART sant 27 75 IPR001005 -
Acco09g1906 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 30 71 - -
Acco09g1906 87 FunFam MYB-like transcription factor 30 72 - -
Acco09g1906 87 Gene3D - 32 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1906 Acco-ChrAcco09 35971273 35974261 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1906 30 83 MYB Transcription Factor Family AT5G52600 48.148 1.83e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1906 Myb_DNA-binding 4.9e-06 CL0123