Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1905 ATGGATTCTCCATTTTCTCAAAAAATACAACTAGAAGTCAACCTTGTCGAAATTTGGTTGTTTGCCGCGATTTGTACTTACAGCTCAGAAAAGCGCAAAACCATGGACAAATGTCGCAGAAAACAAGAAAAGACTGAAATGTCTTACTCTGAAGAGGTGAGCAGTATTGAGTGGGATTTCATAAACATGTCAGAGCAAGAAGAAGATCTCATTTACAGAATGTACAAACTGGTGGGAGACAGATGGAGTCTAATAGCAGGTAGGATTCCAGGTCGAAAAGCTGAAGAGATTGAGAGGTTTTGGATTATGAGACACTCCCAAGTGTTCGCTTCCAGAAGGCAAAACCTCACCCAATGTAAATCTCAATATTAA 372 0.3978 MDSPFSQKIQLEVNLVEIWLFAAICTYSSEKRKTMDKCRRKQEKTEMSYSEEVSSIEWDFINMSEQEEDLIYRMYKLVGDRWSLIAGRIPGRKAEEIERFWIMRHSQVFASRRQNLTQCKSQY 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1905 123 SMART sant 59 107 IPR001005 -
Acco09g1905 123 Pfam Myb-like DNA-binding domain 63 102 IPR001005 -
Acco09g1905 123 FunFam MYB-like transcription factor 62 104 - -
Acco09g1905 123 CDD SANT 62 101 IPR001005 -
Acco09g1905 123 Gene3D - 64 122 - -
Acco09g1905 123 SUPERFAMILY Homeodomain-like 64 108 IPR009057 -
Acco09g1905 123 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 62 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1905 Acco-ChrAcco09 35961464 35964980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1905 63 118 MYB Transcription Factor Family AT5G52600 53.571 8.09e-16 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1905 Myb_DNA-binding 1.2e-06 CL0123