Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1885 ATGAATTCAAAGGGACATAAATTTTTGAGGTTTGATGATTGGAGTTCAGAGTCATCATCTACCACTGAAGGGAAAAATTCTAACGATAATGGATATCATGGAAGAAAACTGAGGCCAAGCGTAAGCGCTGTTTTAGACAGTATCAAAAGAAGACTTGAGAATGGGTCTGATAAGATAACAAACTTGCGGAAATCTTCAACTGTTCATCCTTTAAGTGATAGACCGCCCAGGAGATTGGCTCCTAAAAGAAAAATTCTTGATCCACAGGGGTCGTTCCTTCAGAAATGGAACAAAATATTTGTAATCACATCTGTTTTGGCTGTCTCTGTGGATCCACTGTTCTTTTACATCCCAGCAATTGGAGACACTGGCAAATGCCTTGCGTTGAATCGAAACCTGCGGATTATTGCTTCTGTTCTTCGCACATTCTTTGATCTTTTCTACGTTCTTCACGTAATCTTTCAGTTTCGAACTGGGTTTATTGCTCCTTCTTCTCGCGTATTTGGAAGGGGCGAGCTGGTTAAAGATCATCGGGCTATCATGAAAAGATACTTATCTTCATTCTTTGTCATCGATGTTCTGGCAATTCTTCCACTTCCGCAGGTGGTTATTTTATTTATCATTCCAAAACTGGAGGACTCAGTTCCATTTCTGGCGAAGGACTTGTTGACATATATGATCATGATCCAGTATGTGCCAAGACTCTTTCGCATTTACCCATTATTCAAAGAAGTAACAAGAACTTCTGGCATACTCACAGAGACAGCATGGCTTGGAGCTGGTTGTAATCTTTTTCTGTATATGCTGGCAAGTCATTTGGTTGGAGCTTTTTGGTACCTGCTTTCGGTAGAATCAGGGGTTCGGTGCTGGCACGGAGCATTAAGAAATACAACATATGATGATAATAAGTATCTGATCTGTGGTAGACAGAGTGACACTGTCGTTTCGCTTCTCTCTAACGCATGTGCTGTTGTTGATCCTTCTCAAATTACCAACTCAGCACAATTCAATTTTGGAATATATGCGGATGCTCTGGAATCTGATGTGGTTAATTCAGCAACAGATTTTCTTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAATTTAAGTTCTCTTGGACAGAACCTTAAGACAAGCACTCATGTCCCGGAGATAATCTTTGCTATCTGGATCGCCGTCTTTGGATTAGTTCTGTTCTCTTTCCTTATTGGAAACATGCAGAAATTTCTGCAATCTACAACTGTTAGAGTTGAGGAGATGAGAGTGAAAAGGAGAGATGCAGAGCAATGGATGGCCCACCGTATGCTTCCTGAGAACTTAAGGGAAAGAATTAGACGGTATGAACATTACAAATGGCAACAAAACCGGGGTGTTGAAGAAGAAGCATTAATTCGCAACCTTCCTAAAGATCTCAGAAGGGACATCAAGCGTCATCTTTGCTTGGCTTTACTTAAAAAAGTGCCAATCTTTGAGAAAATGGATGAACAATTGTTGGATGGGATGGCTGACAGATTGAAGCCAATTCTTTATACAGAGAAGAGTTACATTGTTCGTGAAGGAGATCCGGTCGACGAAATGCTCTTCATCATTCGAGGAAAGCTGGCTACTATGACCACAAATGGAGGAAGAACTGGTTTCTTCAACTCCTCAGTTCTGCAAGCTGGTGACTTCTGTGGTGAAGAGCTTCTAACATGGGCCTTGGACCCCAATTCCTCTTCAAATCTTCCAATTTCAACAAGAACAGTGGAGTCCATATCAGAAGTTGAAGCTTTTGCTCTCATGCCTGACGACTTGAAGTTTGTCACTTCCCAATTCCGAAGACTTCATAGCAAACAGCTTCAGCACACTTTCAGGTTTTATTCCTTGCAATGGAAGACGTGGGGTGCCTGTTTCATACAAGCAGCTTGGCGTCGTTACAGCAGAAAGAAGGTAGAGAGGCAATTGCGTGAAGCAGAAGAAAGACTAAAAGATACTTTGGCCAATGAGAATGGATCTTCATCATCATCGACACCAAGTCTTGGTGCCACCATTTATGCTTCAAGGTTCGCTGCCAACGCCTTACGAAACTTGCGACAACACAGGGAACAAAACAGATTGTCACCCAGATTGTTGCCTCTGCTGCCTCAGAAGCCATCTGAGCCTGATTTTACCTCTCAAAGTCACTAG 2172 0.4213 MNSKGHKFLRFDDWSSESSSTTEGKNSNDNGYHGRKLRPSVSAVLDSIKRRLENGSDKITNLRKSSTVHPLSDRPPRRLAPKRKILDPQGSFLQKWNKIFVITSVLAVSVDPLFFYIPAIGDTGKCLALNRNLRIIASVLRTFFDLFYVLHVIFQFRTGFIAPSSRVFGRGELVKDHRAIMKRYLSSFFVIDVLAILPLPQVVILFIIPKLEDSVPFLAKDLLTYMIMIQYVPRLFRIYPLFKEVTRTSGILTETAWLGAGCNLFLYMLASHLVGAFWYLLSVESGVRCWHGALRNTTYDDNKYLICGRQSDTVVSLLSNACAVVDPSQITNSAQFNFGIYADALESDVVNSATDFLQKFFYCFWWGLRNLSSLGQNLKTSTHVPEIIFAIWIAVFGLVLFSFLIGNMQKFLQSTTVRVEEMRVKRRDAEQWMAHRMLPENLRERIRRYEHYKWQQNRGVEEEALIRNLPKDLRRDIKRHLCLALLKKVPIFEKMDEQLLDGMADRLKPILYTEKSYIVREGDPVDEMLFIIRGKLATMTTNGGRTGFFNSSVLQAGDFCGEELLTWALDPNSSSNLPISTRTVESISEVEAFALMPDDLKFVTSQFRRLHSKQLQHTFRFYSLQWKTWGACFIQAAWRRYSRKKVERQLREAEERLKDTLANENGSSSSSTPSLGATIYASRFAANALRNLRQHREQNRLSPRLLPLLPQKPSEPDFTSQSH 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1885 723 Gene3D Jelly Rolls 489 609 IPR014710 -
Acco09g1885 723 MobiDBLite consensus disorder prediction 14 38 - -
Acco09g1885 723 MobiDBLite consensus disorder prediction 700 723 - -
Acco09g1885 723 Coils Coil 45 65 - -
Acco09g1885 723 Pfam Ion transport protein 96 419 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Acco09g1885 723 CDD CAP_ED 491 622 IPR000595 -
Acco09g1885 723 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 75 718 - -
Acco09g1885 723 MobiDBLite consensus disorder prediction 14 28 - -
Acco09g1885 723 ProSiteProfiles cAMP/cGMP binding motif profile. 491 575 IPR000595 -
Acco09g1885 723 FunFam Cyclic nucleotide-gated ion channel 1 418 482 - -
Acco09g1885 723 FunFam Cyclic nucleotide-gated ion channel 1 489 607 - -
Acco09g1885 723 SMART cnmp_10 491 622 IPR000595 -
Acco09g1885 723 Coils Coil 643 663 - -
Acco09g1885 723 Gene3D Helix hairpin bin 418 482 - -
Acco09g1885 723 Gene3D - 99 415 - -
Acco09g1885 723 SUPERFAMILY Voltage-gated potassium channels 87 413 - -
Acco09g1885 723 SUPERFAMILY cAMP-binding domain-like 420 614 IPR018490 -
Acco09g1885 723 Pfam Cyclic nucleotide-binding domain 512 600 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1885 Acco-ChrAcco09 35761016 35765196 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1885 1 720 Ion Channels AT5G53130 63.361 0.0 922