Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1881 ATGGAGGACCACATCGCCACCACTAAGGCTTACAATCTCTTTGTGAAGCTCTTGGACGGAAAAACCCTAACCCTAAAATTCCCATCTCCTACTCTTCTCGCTAATTCCGTGAAGGATCGCATTTTCGAGGTTACCAGAATCCCCACACAATACCAGCGCCTTGTTACTGGCGTCCAAGACCTTAACGGTAACGGATCTGTAATCTCCTGCTCGCCGGAAGGCGGAGATGTGTTCCCCACCGTCCATCTGCTGCTGCGACTCGCCGGTGGCAAGGGAGGGTTTGGATCACTTTTGCGTGGTGCAGCCACCAAGGCTGGGCAGAAGAAGACGAACAACTTCGATGCTTGCAGAGATATGAGCGGCCGGAGGTTGAGGCACGTGAACGCGGAGAAGAGATTGGAGGAATGGAAGGCGGAGGAGGCGGAGAGGAAGCTGGAGAAGATTGCGGAAGAGTTTTTTAAGAAGCAGGCGAAGAAGGGCAAGAAGGGTGTGGGCGATGGCGAGGCGCGCAAGTATGTGGCAAAATACAGGGAGGAGTCTGAGCGATGCGCTGCTGAGGTTGCCGAGTCGGTGAAGGAGGCTTTGATGTCTAGAAATGGCAAGAGAAAGGTTTCAAGTTTTAAAAAAGACGGAGCTGATGCAAAGAAGATAAAGATATGGATGGGAAAGAGGAAATTAAATGAAAGTGATAGTGATGATTCTGATGAGGATGTAAGCGAAGATGAAACAGAAAATGAGAAATCAGCTGTGTTAAATAATGGGAATGACTCAGACTCAAATAAGGCTGAAGGCAGTTCAGGTTCAGTAACTGGTGGGAAACAGGATGGTGAATCTTCTGTGGGAGGCTCAAGTGGGAGTTGCTCTGAAGAAGAGAAAGATACTGTTCTAGAAGGAAAAATGGACTCCAGCAATTGTCTCAACATTGAATCTCTTCAGAACACTATGGGCAAATCGGTTGAACCTGTGACATGTGATGAGATGGGAAATGGTGTCACTAACCTTGTTTTGGAGTCTGCAGCTTTGGGAATTGATGCTGAAGAAGATGGAAAGGAGGACTCTAGTGAAGCTGACAAGCTTGATTCTGCAGTTGCTCAAGCAACAAATCTTATAAGCTCACAGCATGTGGTCGATGCAAGCAAATCAATGGATATTGAAACTGTTGGATTGCATGAGGATAAAGCATCATCTCATGAAGAAACTCACTCAAGTGCCATTGCTCAGGAAATAGATGAGCATTTGAATTTTGAGGCATTTAATTCAGCTGCAGAACTTGAGGTTCTTGGCCTCGAGAGGTTGAAGTCCGAACTGCAGGAGCGCGGCTTAAAATGTGGAGGCACATTGCTGGAGCGTGCTGCCAGGCTTTTCCTTCTAAAATCGACTCCACTGGATAAACTTCCGAAAAAGCTGCTTGCCAAGAAATGA 1422 0.4719 MEDHIATTKAYNLFVKLLDGKTLTLKFPSPTLLANSVKDRIFEVTRIPTQYQRLVTGVQDLNGNGSVISCSPEGGDVFPTVHLLLRLAGGKGGFGSLLRGAATKAGQKKTNNFDACRDMSGRRLRHVNAEKRLEEWKAEEAERKLEKIAEEFFKKQAKKGKKGVGDGEARKYVAKYREESERCAAEVAESVKEALMSRNGKRKVSSFKKDGADAKKIKIWMGKRKLNESDSDDSDEDVSEDETENEKSAVLNNGNDSDSNKAEGSSGSVTGGKQDGESSVGGSSGSCSEEEKDTVLEGKMDSSNCLNIESLQNTMGKSVEPVTCDEMGNGVTNLVLESAALGIDAEEDGKEDSSEADKLDSAVAQATNLISSQHVVDASKSMDIETVGLHEDKASSHEETHSSAIAQEIDEHLNFEAFNSAAELEVLGLERLKSELQERGLKCGGTLLERAARLFLLKSTPLDKLPKKLLAKK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1881 473 Coils Coil 124 158 - -
Acco09g1881 473 Gene3D - 3 92 - -
Acco09g1881 473 SUPERFAMILY Ubiquitin-like 11 91 IPR029071 -
Acco09g1881 473 Coils Coil 419 439 - -
Acco09g1881 473 MobiDBLite consensus disorder prediction 248 289 - -
Acco09g1881 473 Pfam Replication stress response SDE2 C-terminal 397 472 IPR025086 -
Acco09g1881 473 SMART ubq_7 11 86 IPR000626 GO:0005515
Acco09g1881 473 PANTHER SPLICING FACTOR SF3A-RELATED 12 472 - -
Acco09g1881 473 Pfam Silencing defective 2 N-terminal ubiquitin domain 11 161 IPR024974 -
Acco09g1881 473 MobiDBLite consensus disorder prediction 226 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1881 Acco-ChrAcco09 35731966 35734541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1881 394 472 C2H2 Transcription Factor Family AT5G06160 39.080 1.74e-08 54.7