Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco09g1853 | ATGGGAAGAGCTCCATGTTGTGCAAAAGTAGGGTTACGCAGAGGTCCGTGGACTCCTAAAGAAGATGCATTGCTCACTAAGTATATTCAAGCTCATGGCGAGGGTCAATGGAAATCTCTTCCCAAAAAAGCTGGGCTTCTGAGATGTGGGAAAAGTTGCAGACTGAGATGGATGAACTATCTGAGACCTGACATAAAGAGAGGCAACATAACTGCTGAAGAAGACGACCTCATCATCAGAATGCATGCTCTGATCGGAAACCGGTGGTCTCTCATCGCCGGCCGATTACCAGGACGAACCGATAACGAAATCAAGAACTACTGGAACACTCATCTCAGCAAAAGTGTCAAAGATCAACAATCCAGGCCTGATCATCACCAACCACTAAGAGACAACACCGACGATAAGGCCGAGAATAAGATCATTAAGAAGAAGAAGAAGCCCTCAAAAAATAACAGTAAGAATAAATCCAACAGTGTCGACGAAGAAGCAGAGAAGAAGACCAATATATATCTGCCAAAACCAATTAGGCTTAGGGCTTTACATATAAGTGGTGGAAACGAAGAATATTCCAAGAACGGTTCTTCTTCAGCAAGTGGATCTTCAAGCCAACAGTTGTTACCACAGAAGGAAGATATGCATAATTATGTAATGAGTTATGAGCCCTGGGTTGGTGAAAATGATGTGTTTGGATTTTCTGTGGAAGAAGATCAGAATATTGACCGAGTCAACGGCTCAGTATCAGAAGAAAATATTATTAATAATATTAATGATATGGAATGCGAGTCACTGAAGAGGTTATACGAGGAGTATTTGCAGCTCTTGAAGGATGATAATAATGTCAGTGGTGAAAACCAAGGGCAACTGTTGGATTCTTTTGATCAATCTTTGTTTCCCTAG | 900 | 0.4156 | MGRAPCCAKVGLRRGPWTPKEDALLTKYIQAHGEGQWKSLPKKAGLLRCGKSCRLRWMNYLRPDIKRGNITAEEDDLIIRMHALIGNRWSLIAGRLPGRTDNEIKNYWNTHLSKSVKDQQSRPDHHQPLRDNTDDKAENKIIKKKKKPSKNNSKNKSNSVDEEAEKKTNIYLPKPIRLRALHISGGNEEYSKNGSSSASGSSSQQLLPQKEDMHNYVMSYEPWVGENDVFGFSVEEDQNIDRVNGSVSEENIINNINDMECESLKRLYEEYLQLLKDDNNVSGENQGQLLDSFDQSLFP | 299 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco09g1853 | 299 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 62 | 116 | IPR017930 | - | |
| Acco09g1853 | 299 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 224 | - | - | |
| Acco09g1853 | 299 | CDD | SANT | 16 | 61 | IPR001005 | - | |
| Acco09g1853 | 299 | MobiDBLite | consensus disorder prediction | 187 | 207 | - | - | |
| Acco09g1853 | 299 | Gene3D | - | 14 | 66 | - | - | |
| Acco09g1853 | 299 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Acco09g1853 | 299 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 61 | IPR017930 | - | |
| Acco09g1853 | 299 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Acco09g1853 | 299 | SMART | sant | 13 | 63 | IPR001005 | - | |
| Acco09g1853 | 299 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Acco09g1853 | 299 | Gene3D | - | 71 | 146 | - | - | |
| Acco09g1853 | 299 | MobiDBLite | consensus disorder prediction | 188 | 207 | - | - | |
| Acco09g1853 | 299 | MobiDBLite | consensus disorder prediction | 114 | 166 | - | - | |
| Acco09g1853 | 299 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Acco09g1853 | 299 | Pfam | Myb-like DNA-binding domain | 67 | 112 | IPR001005 | - | |
| Acco09g1853 | 299 | CDD | SANT | 71 | 112 | IPR001005 | - | |
| Acco09g1853 | 299 | SUPERFAMILY | Homeodomain-like | 11 | 108 | IPR009057 | - | |
| Acco09g1853 | 299 | MobiDBLite | consensus disorder prediction | 117 | 142 | - | - | |
| Acco09g1853 | 299 | FunFam | Myb transcription factor | 11 | 67 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco09g1853 | Acco-ChrAcco09 | 35382300 | 35383763 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco09g1853 | 4 | 171 | MYB Transcription Factor Family | AT3G13540 | 54.913 | 8.21e-68 | 210 |
Transcription factors information