Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1846 ATGAGCTTTTGCTATGATATGGATGGCAGGGTTTTGGATTCAGGTTCTTTCCCTCCTACAATTGTGTTCGGATGTCGATCCCTTCGGCATTCCATTTCTCTAGAATCGCCTCCCCATAATTCTGCGGGGGTTCGTTGTTCTTTTGTGGATCAGCAACGTTTAATGGATTCTGGGGTTGAATCGGCAATGCCTGAAAACGATGGAACAGGGACAAAAGAGCCAGCCGAGTTGGAGGAGGATTTTGCAGAGAAGGACCCAACTGGTCGGTATACGCGGTACAATGAAATCTTAGGCAAGGGTGCTTTCAAGACCGTTTATAGGGCTTTTGATGAAGTTGATGGGATCGAAGTTGCTTGGAACCAAGTTAGGATTAATGACCTTTTGCACTCAGCAGTAAATTTTGAAAAACTGTACTCTGAAGTTCACATACTGAAGTCTTTGAAACATGAAAATATCATGAAGTTCTATCATTCCTGGGTTGATGATGAGAAAAAAACTATCAACATGATCACTGAGCTCTTCATGTCTGGAACTTTGAGACAATACCGTAAGAAGCATAAAAATGTTGACCTGAAGGCCATCAAAAGTTGGGCTAGGCAGATTCTCCAAGGTTTAGCCTACATCCATAGTCAAAAGCCTCCTATTATTCATAGGGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCATGGAGAAGTTAAGATAGGAGACCTAGGCTTGGCAACTGTGATGCAGCAACCAGTTGCTCGAAGTGTCATTGGGACTCCTGAATTTATGGCGCCTGAGCTTTATGAAGAGAAATACAATGAGCTTGTCGACGTCTATTCTTATGGGATGTGCATGTTAGAGATGGTTACTTTTGAGTATCCGTATAGTGAATGCAAAAATCCAGCTCAAGTCTTTAAGAAAGTTACCTCTGGCATTAAACCTGCTTCTCTTAACAAGGTGAATGACCGCCAAATTAGAGAGTTTATTGAAAAATGTTTGGTTCCAGCATCTCAGAGATTGTCTGCAGAGGAGCTTCTCAAAGACCCATTTCTGCAAGTTAAGAATCCAATCCGAGATCCTTTACAGTTGCCTCATAAAACTCCAAGGTCTATAAATTTGTCCAGGTCTGGTGCTACATCGATCGACCTAGATGCTGACTATAAACAGATTTCTGTGAGTACCTTTGCAGAAAGCTACTGTGGAAGTCCTCGGTTTCCAGTTGTAGAATTCCAGAGGTTATCTGAGGAGAATGAATTTAGTTTGAAAGGGACAAAAAAAGATGATAAATCTTTATCGTTGACCCTTGCTGAAAGCAACTGTGGAAGTCGACCTAGGGATATACATTTTCCTTTTTATCTTGATTCAGACACTGCAGTCTCAGTGGCCTCAGAGATGGTTGAACAACAACTAGATTTAGCAGAATGTGATGTGCTCTCCATTGCCGAGCTTATTGATCATTTGATAACAAAACTTCTTCCTGGCTGGAAACCTTCATCTGATTGTTCAAGTGAAGTAACAAGCCTCAATGGTGGTGGGTCTTCAACACAGGTTGATGGCCAGACCCAAACAAGTCTATGGGACTCCATCCTAACTAGTGATCTTGCGGGATCAGTTACTTACCAAGATGATGTGTATGAGCCGATTACCGGTGTTCAAGATGGTGAGGCTACTACTGAGGGGGGCAGCTTGCTAGGTGACACTGTTAATAATGCTACTTTGCAATGTTCCCAAGGATCCGCAACCTCTGCTCTAGTTGCGAAGAGTTCATGTATAAAAACCGACAACTCTCTCGATTCCAATGTGAGCTCTAAATCCTTGAACTGGTCTCTCTCTGAACTGGATCTTGAGGATGCATCTCTTGAGGCTTGCAAACTGGAGAGAACAACAGATAACAACAGTGTGGGGGAAGGCATTGGGATGAACAACTTTACTGAGAATGAAACGGATCCACCATTTAATGGAACATATAATGTTTTAAGCTTGACAAGCAACTGTTCTTTTTCTTTAGCAGAGGAGGACGCAGATCCTGAGCTGCGGTTGGAAATTGAGGCGATTGAAGCTTTCTATCGAGAACAGTTTGAAGAACTTTCTAAAAGGAAGAAGGCGCATTTGAATCTCATCAGAAAGGGATGGATGGCTAAGAAGTAA 2139 0.4231 MSFCYDMDGRVLDSGSFPPTIVFGCRSLRHSISLESPPHNSAGVRCSFVDQQRLMDSGVESAMPENDGTGTKEPAELEEDFAEKDPTGRYTRYNEILGKGAFKTVYRAFDEVDGIEVAWNQVRINDLLHSAVNFEKLYSEVHILKSLKHENIMKFYHSWVDDEKKTINMITELFMSGTLRQYRKKHKNVDLKAIKSWARQILQGLAYIHSQKPPIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMQQPVARSVIGTPEFMAPELYEEKYNELVDVYSYGMCMLEMVTFEYPYSECKNPAQVFKKVTSGIKPASLNKVNDRQIREFIEKCLVPASQRLSAEELLKDPFLQVKNPIRDPLQLPHKTPRSINLSRSGATSIDLDADYKQISVSTFAESYCGSPRFPVVEFQRLSEENEFSLKGTKKDDKSLSLTLAESNCGSRPRDIHFPFYLDSDTAVSVASEMVEQQLDLAECDVLSIAELIDHLITKLLPGWKPSSDCSSEVTSLNGGGSSTQVDGQTQTSLWDSILTSDLAGSVTYQDDVYEPITGVQDGEATTEGGSLLGDTVNNATLQCSQGSATSALVAKSSCIKTDNSLDSNVSSKSLNWSLSELDLEDASLEACKLERTTDNNSVGEGIGMNNFTENETDPPFNGTYNVLSLTSNCSFSLAEEDADPELRLEIEAIEAFYREQFEELSKRKKAHLNLIRKGWMAKK 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1846 712 SUPERFAMILY Protein kinase-like (PK-like) 86 349 IPR011009 -
Acco09g1846 712 Gene3D - 426 514 - -
Acco09g1846 712 FunFam probable serine/threonine-protein kinase WNK9 174 353 - -
Acco09g1846 712 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 68 618 - -
Acco09g1846 712 FunFam Probable serine/threonine-protein kinase WNK1 76 172 - -
Acco09g1846 712 Pfam Protein kinase domain 94 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1846 712 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 443 485 IPR024678 GO:0004674|GO:0005524
Acco09g1846 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Acco09g1846 712 Gene3D Transferase(Phosphotransferase) domain 1 174 354 - -
Acco09g1846 712 Gene3D Phosphorylase Kinase; domain 1 75 172 - -
Acco09g1846 712 SMART serkin_6 91 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1846 712 ProSiteProfiles Protein kinase domain profile. 91 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1846 712 CDD STKc_WNK 89 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1846 Acco-ChrAcco09 35322242 35326009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1846 78 626 MAP Kinase Kinase Kinase AT5G41990 50.181 1.70e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Acco09g1846 Pkinase 2.9e-53 CL0016