Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1822 ATGGATGATTTGATCATCCCTCCTTCTTCCTCTTCCTCTCTTCTCTGTCTCCCCCGAGAATCCCTACCCTCCCTTCAGCAAAAGCTCCAAATCCTCCTCCACAGTCAGCCTGATTGGTGGGTCTACGCCATTTTTTGGCAGATTTCCAACGACGGCGTTCAAGGAAATCTCCTCCTCTCTTGGGGCGAAGGCCATTTTAGTGGCACCAAGGACACCTCCCCTCGTCTCTCCAGTTCCACCACCGTCACTCCCCATTACTCAGACAGAACCAGCTTCATGAACAGCACTCACTCTCTCATCAACGATAATTCCCATAATAGCTCCAATATTTGCAGCGACCTCCACGATACAGAGTGGTTCTACGTCATGTCCTTGACTCGCACCTTCTCTGTTTCCTCCTCTGCTTCTCTCCCCTGCAAAGCCTTAACTTCTGGTTCTCTGCTCTGGCTCAACAGTGATCACGACCTTCAACTTTGCAACTGTGAGAGAGCCAAGGAGGCTTACTTGCACGGGATTGAGACTCTCATCTTCATACCCACCAATCATGGAGTCATCGAGATGGGCTCCACCGATCTCATCCCGGAGAACTGGGCTATAGCGCAGCAGGCCAAAGCTCTGTTCGGGTCTGACCTCATCGCCAAGCAAACGGCCAGCAACAACCTGATTCAGTTCTTCGACGATCAGAACATTTCCTTCGCCGATATCGGCATTATTGCTGGCGTGCAAGAAGAAGACGACAATTCCCACGTGCCCGACGGCAATAACAGCGCGAGGAATAATTACAGCAAGAGGAAGGCGGGACAGAGGACTAGGGAAAATTCCGGATTCAAGTTCGGGTTTGCGGATTCTGAGCATTCTGATTCAGACTGTAATCCTTCCATAGAGAAAAGAACCCCGAAGAAGAGAGGGAGAAAACCCGGTCTGGGCCGGGAAACGCCGATGAACCACGTGGAGGCAGAGCGGCAGCGACGGGAGAAGCTGAACCACCGATTCTACGCGCTACGCGCGGTGGTTCCAAACGTATCGAGAATGGACAAGGCTTCTCTGTTATCAGACGCCGTGGATTACATCAACGAGTTGAAATCCAAGATCGAGGATTTAGAATCGCAGATTCAGAAGGAAACGACCAACAATAATAACAGCAATAAGAAAGTGAAAATGGAAACGGCGGACACCAGCACGGCGGACAACCAGAGCGCGACGACTTCGACAGTGGAGCAAACGACGGTGGTGGGGGCGACGTCGTCGGGAGGGGGAAGCACGACGGGGGTGGAGGTGGAGGTGGAGGTGAGGATGATGGGACCGGAGGCAATGGTGAGGGTCCAATCGGAGAACGCGAACCACCCGGGAGCGAGGCTAATGGTGGCGCTGAGAGATTTGGAGCTAGGGGTTCACCATGCGAGCATGTCGTGCGTGAATGAGTTAATGCTTCAAGACGTGGTGGTGAAGATTCCTGAAGATCTCAGAAACGAAGAGAATCTCAAATCTGCCATTCTCACTCGTTTGGCTCCCTAG 1515 0.5254 MDDLIIPPSSSSSLLCLPRESLPSLQQKLQILLHSQPDWWVYAIFWQISNDGVQGNLLLSWGEGHFSGTKDTSPRLSSSTTVTPHYSDRTSFMNSTHSLINDNSHNSSNICSDLHDTEWFYVMSLTRTFSVSSSASLPCKALTSGSLLWLNSDHDLQLCNCERAKEAYLHGIETLIFIPTNHGVIEMGSTDLIPENWAIAQQAKALFGSDLIAKQTASNNLIQFFDDQNISFADIGIIAGVQEEDDNSHVPDGNNSARNNYSKRKAGQRTRENSGFKFGFADSEHSDSDCNPSIEKRTPKKRGRKPGLGRETPMNHVEAERQRREKLNHRFYALRAVVPNVSRMDKASLLSDAVDYINELKSKIEDLESQIQKETTNNNNSNKKVKMETADTSTADNQSATTSTVEQTTVVGATSSGGGSTTGVEVEVEVRMMGPEAMVRVQSENANHPGARLMVALRDLELGVHHASMSCVNELMLQDVVVKIPEDLRNEENLKSAILTRLAP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1822 504 MobiDBLite consensus disorder prediction 244 323 - -
Acco09g1822 504 Coils Coil 350 384 - -
Acco09g1822 504 CDD bHLH_AtAIB_like 309 373 - -
Acco09g1822 504 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 303 372 IPR036638 GO:0046983
Acco09g1822 504 Gene3D - 309 390 IPR036638 GO:0046983
Acco09g1822 504 PANTHER MYC 21 501 IPR045084 GO:0003700|GO:0006355
Acco09g1822 504 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 25 207 IPR025610 -
Acco09g1822 504 MobiDBLite consensus disorder prediction 282 297 - -
Acco09g1822 504 SMART finulus 317 366 IPR011598 GO:0046983
Acco09g1822 504 Pfam Helix-loop-helix DNA-binding domain 315 360 IPR011598 GO:0046983
Acco09g1822 504 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 311 360 IPR011598 GO:0046983
Acco09g1822 504 MobiDBLite consensus disorder prediction 305 323 - -
Acco09g1822 504 MobiDBLite consensus disorder prediction 371 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1822 Acco-ChrAcco09 35028819 35030333 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1822 25 503 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G00870 35.073 2.36e-74 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco09g1822 bHLH-MYC_N 1.3e-45 CL0161