Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1800 ATGGGGAAGAAGGGAGGTACCTCCTGGTTGACCGCTGTGAAAAGAGCATTTAGATCTCCCACCAAAGATACTGACAAAAGAAACCAAGAAGAAGACGATGACAAGAAGAGAGAAAAACGACGATGGATTTTCAGAAAAACACCGAATCAGGACGCAGCGGTGAGTATCCAGCACACTCCGACAAAGCAAAACTCCGATTCGGCTGCTACGACTGCAGGTCGTGTACCTGTGCCGACGGCGACGGCGACGGCGCCAAATCATAACAATGCGCTCGCCGGGGCGGTGGCGAAGGCTGAAGCGGCGAGGGGCACCGCTCAGGCGGCGGTGGAAGCTGCTAGATTGAAGAGGCCTTCGAATCAAGCTAGGGAGAACTATGCTGCTACGGTGATTCAAACTGCTTTCAGAGGATACCTTGCAAGGAGGGCTCTTCGAGCGCTTAAAGGGTTGGTGAAATTGCAAGCTTTGGTGAGAGGTCATAATGTTCGGAAGCAAGCAAAAATGACACTTCGGTGCATGCAGGCTCTGGTTCGAGTACAAGCCAGAGTGCTTGACCAACGCTTGAGGGTCTCACACGAGACCAGTAGTAGAAAATCCACATTCAGTGACACTAACAGCGTTTGGGAGTCTCGGTATCTTCAGGATATTTCAGATAGGAGATCAATGTCAAGAGAAGGAAGCAGTATTGCAGACGAATGGGATGAACGCCCACACACAGTTGAAGAAGTTAAAGCCATGTTGCAGCAGAGGAAAGAATCTGCAGCTATGAAGCGTGACAAGTCATTGTCTCAAGCTTTTTCGCAACAGCTTTCGAGAAATAGTTGGAACTCATCGATTGGAAATGAAGATGAACTGGAAGAGAGACCGAAATGGCTGGACCGGTGGATGGCTTCAAAGCCATGGGAGACCAGAGGAAGAGCTTCGACTGATCATAGAGACACCATTAAAACTGTAGAAATTGACACTTCTCAGCCTTGCTCATATCTGGGATCTAACTACAGAAGATCGCATCCAAATTATCAATACAACCCACACCAACCCCAGAGACATTCTGTGGCTTCCCCACTCCACAGAAGCCACCAAAATAGTTCTATTCATCAATCTCCTGCAACCCCATCTCCCGCAAAATCAAGGCCTATTCAAATCCGGTCCGCGAGCCCTCGATGTGGTAGGGAAGATAGAAGCTTCCATACATCTCAAACCCCAAGTTTGAGGTCCAATTACCATTATGCTGGAGTGCTGTACCAAAATGGAAGGGTTGGAACAAGTATCAGTGGTGGAGGTACATTGCCTAATTACATGGCTGCAACTGAGTCTGCGAAGGCCCGAGTTCGGTCTCAGAGTGCACCGAGGCAGAGGCCATCGACGCCGGAGAGGGACAGGGCGGGATCTGTAGCTAAGAAAAGGCTTTCATTCCCTAATGCTCCAGACCCTTATGGTGCTGCAATGGGTTATGGAAATTATGGGCACAGTTTAAGAAGTCCAAGCTTCAAAAGCGTGAGTGGTTCACACTTTGGGTTGGAGCAACAATCCAACTATTCTTCTTGCTACACTGAGAGTCTTGGTGGCGAGATTTCTCCGTCTTCAACCGGTGATCTTAGAAGGTGGTTGAGATGA 1614 0.4901 MGKKGGTSWLTAVKRAFRSPTKDTDKRNQEEDDDKKREKRRWIFRKTPNQDAAVSIQHTPTKQNSDSAATTAGRVPVPTATATAPNHNNALAGAVAKAEAARGTAQAAVEAARLKRPSNQARENYAATVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRLRVSHETSSRKSTFSDTNSVWESRYLQDISDRRSMSREGSSIADEWDERPHTVEEVKAMLQQRKESAAMKRDKSLSQAFSQQLSRNSWNSSIGNEDELEERPKWLDRWMASKPWETRGRASTDHRDTIKTVEIDTSQPCSYLGSNYRRSHPNYQYNPHQPQRHSVASPLHRSHQNSSIHQSPATPSPAKSRPIQIRSASPRCGREDRSFHTSQTPSLRSNYHYAGVLYQNGRVGTSISGGGTLPNYMAATESAKARVRSQSAPRQRPSTPERDRAGSVAKKRLSFPNAPDPYGAAMGYGNYGHSLRSPSFKSVSGSHFGLEQQSNYSSCYTESLGGEISPSSTGDLRRWLR 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1800 537 Gene3D - 120 176 - -
Acco09g1800 537 SMART iq_5 145 166 IPR000048 GO:0005515
Acco09g1800 537 SMART iq_5 122 144 IPR000048 GO:0005515
Acco09g1800 537 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Acco09g1800 537 Pfam IQ calmodulin-binding motif 150 166 IPR000048 GO:0005515
Acco09g1800 537 MobiDBLite consensus disorder prediction 325 379 - -
Acco09g1800 537 MobiDBLite consensus disorder prediction 1 71 - -
Acco09g1800 537 MobiDBLite consensus disorder prediction 50 71 - -
Acco09g1800 537 MobiDBLite consensus disorder prediction 436 472 - -
Acco09g1800 537 MobiDBLite consensus disorder prediction 259 279 - -
Acco09g1800 537 Pfam Protein of unknown function (DUF4005) 385 486 IPR025064 -
Acco09g1800 537 MobiDBLite consensus disorder prediction 515 537 - -
Acco09g1800 537 MobiDBLite consensus disorder prediction 18 46 - -
Acco09g1800 537 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
Acco09g1800 537 FunFam IQ-domain 11 122 173 - -
Acco09g1800 537 PANTHER IQ-DOMAIN 5-RELATED 1 473 - -
Acco09g1800 537 MobiDBLite consensus disorder prediction 257 282 - -
Acco09g1800 537 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Acco09g1800 537 MobiDBLite consensus disorder prediction 325 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1800 Acco-ChrAcco09 34777416 34779543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1800 9 537 IQD Protein Family AT4G00820 57.790 9.15e-178 509