Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1799 ATGCGGGAGAACATGAGCATCTCAGTGAATGGACAATCCCAGGTGCCTCCTGGTTTTCGCTTCCATCCCACCGAAGAGGAGCTTTTGCAGTACTACCTTAGGAAGAAGGTCTGCTTCGAGAAGATCGACCTCGACGTAATTCGTGATGTCGATCTCAACAAGCTTGAGCCTTGGGATATTCAAGAGAAGTGCAAGATCGGAACCACCCCACAAAACGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCGACCGGAACCCGAACGAACCGGGCTACAGCGGCCGGATTCTGGAAGGCAACAGGGCGGGACAAGGTGATATACGGCAGCGGAAAGAGGATTGGGATGAGGAAGACGCTGGTTTTCTACAAAGGACGTGCCCCTCACGGCCAAAAGTCTGATTGGATCATGCATGAGTATAGGCTTGAAGATAACAACACCACCAACACCGAGACCAGCATTGTGACGAATGTAATAGGAGATGGAGCACAGGAAGAAGGGTGGGTGGTGTGCAGGATATTCAAGAAGAAGAACCATCTCAAATTAACCCTAGAGAGCCCCTTGGCTTCATCCATTTCAGAGGAAACAATCAGAAGCAGCCACCACCACGAATCCTCCATGTTCGACGTCGACGACGACGAGGAGGGAGCTCTGGAGCAAATTCTCGAGCAAATGGGAAGAAGCTGTTGCAAAGAAGAACAAGAACAACAAAACGACCCCACCTCCAACAACAACAACAACCGAAGAATCACCAGACCGTTTGACGACACTGTCATGAACAACAACAACGACTTTAACAATGGCTACTTCCACCATGACAGGTCCTTGAAGCTTCCTCGCTTGGAAAGCCCAAAATCTAATAACAACTACGGGTACCACCCTATTATCGAAGGGGCATACGGCGGCTGCGGTGGTGAAACCAGCTTTGTTCATCATCAAACGGAATCAGCTAGTTTGTCTGTTAACGGTGGTCTAATCACGAACTGGGCGGCGCTGGATCGGCTGGTAGCTTCACAGCTTAATGGCGGCCAAACGACGGAAACTTCTCGGAGCCCACCTTACTTCAACACCACCGGCGCTGGAGACCCCACCACCATTGGGTATGGGTTGGGCGAGCATGATCTGCAACTTCCGACCCTACGATCTTCGTTGTCACTTTCATCAATAATATCATCATCAGGCCTCAATAGTACAACTGGAACTAATTACGATTACACCACCAGCGAGATTGACCTCTGGAACTTTGCCCGATCCGCATCATCCTTAATCTCAGGCTCCGAACCACTCTGCCACGTGTCCAACACATCATCAATGTAG 1320 0.4992 MRENMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVCFEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYGSGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLEDNNTTNTETSIVTNVIGDGAQEEGWVVCRIFKKKNHLKLTLESPLASSISEETIRSSHHHESSMFDVDDDEEGALEQILEQMGRSCCKEEQEQQNDPTSNNNNNRRITRPFDDTVMNNNNDFNNGYFHHDRSLKLPRLESPKSNNNYGYHPIIEGAYGGCGGETSFVHHQTESASLSVNGGLITNWAALDRLVASQLNGGQTTETSRSPPYFNTTGAGDPTTIGYGLGEHDLQLPTLRSSLSLSSIISSSGLNSTTGTNYDYTTSEIDLWNFARSASSLISGSEPLCHVSNTSSM 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1799 439 SUPERFAMILY NAC domain 9 177 IPR036093 GO:0003677|GO:0006355
Acco09g1799 439 ProSiteProfiles NAC domain profile. 15 177 IPR003441 GO:0003677|GO:0006355
Acco09g1799 439 MobiDBLite consensus disorder prediction 229 260 - -
Acco09g1799 439 MobiDBLite consensus disorder prediction 236 260 - -
Acco09g1799 439 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Acco09g1799 439 Gene3D NAC domain 24 182 IPR036093 GO:0003677|GO:0006355
Acco09g1799 439 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 243 - -
Acco09g1799 439 FunFam NAC domain-containing protein 24 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1799 Acco-ChrAcco09 34747526 34749137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1799 1 437 NAC Transcription Factor Family AT2G46770 51.025 6.38e-132 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco09g1799 NAM 1.5e-35 No_clan