Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1794 ATGTCTCATCCAAGGCAATTCCAGATGGTGGGTGGTGGTGCTAATAATCCTGCAGGGCATTACAATGACACAACTTTTACTAAAATCTTTGTTGGTGGATTGGCTTGGGAGACTCAAAGGGACACAATGAGGCGGTATTTTGAGCAGTTTGGTGAGATCCTTGAGGCTGTTGTTATCACAGACAAGAACACTGGGAGATCCAAGGGTTATGGCTTTGTTACATTTAAGGATCCAGAAGCAGCCATGAGAGCATGTCAGAATCCTTCTCCAGTTATTGATGGAAGAAGAGCAAATTGCAATCTTGCATCTCTTGGAGCAAACAAGAATCGCCCACCAACTCCTCAACATGGAGCAGGACGGTTCCGACCAGGTCCTGGACTTGTGGCTACACCTGCATACCATGGCTCTTCCTCTTCTACATTTTACCATCAGCCCTCTGGTCAATATACATTTCCTTATTCAGCTTATGGGTATTCTGGATATTCACAAGACACCATGTATCCCATGAACTATTATAGTGTGTATGGAGGAGGAGGTCAACAGTTTTCACCATATTACACATCCAGTGGGGCATCTGGGCCACCAGGACTGGTCCATAATATTTACCCTTTCTATGCTCAGACTAGCCACCAGGCTCATAATCAAGGCTTTGGACTTCATCAATATCCTCAAATGCTACAGTTCCCATTTCTTCCTCAGCACTATGCCTCCTCTGGGATACTCTCTTTTCCTTCTTCAATGCCATTGTCAACAACAACAACAACTAGTGCAGCTGCAACAACAGCGACAACAGCAGCAGCAGCAACAGTCACAGCCATAGCAACAGCAACAGCAACAACTGGGGCAGGTGCTTCACAATCTTCTTCAGGAACAGCTTCTGAGCAAAAATCGTCAACTTAG 900 0.4544 MSHPRQFQMVGGGANNPAGHYNDTTFTKIFVGGLAWETQRDTMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFKDPEAAMRACQNPSPVIDGRRANCNLASLGANKNRPPTPQHGAGRFRPGPGLVATPAYHGSSSSTFYHQPSGQYTFPYSAYGYSGYSQDTMYPMNYYSVYGGGGQQFSPYYTSSGASGPPGLVHNIYPFYAQTSHQAHNQGFGLHQYPQMLQFPFLPQHYASSGILSFPSSMPLSTTTTTSAAATTATTAAAATVTAIATATATTGAGASQSSSGTASEQKSST 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1794 299 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 86 IPR000504 GO:0003723
Acco09g1794 299 CDD RRM_RBM24_RBM38_like 27 102 - -
Acco09g1794 299 SMART rrm1_1 28 100 IPR000504 GO:0003723
Acco09g1794 299 Gene3D - 4 120 IPR012677 -
Acco09g1794 299 FunFam RNA-binding protein 24-B isoform X1 14 120 - -
Acco09g1794 299 SUPERFAMILY RNA-binding domain, RBD 20 126 IPR035979 GO:0003676
Acco09g1794 299 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 104 IPR000504 GO:0003723
Acco09g1794 299 MobiDBLite consensus disorder prediction 279 299 - -
Acco09g1794 299 PANTHER BOULE-RELATED 18 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1794 Acco-ChrAcco09 34675366 34677332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1794 23 103 C2H2 Transcription Factor Family AT2G19380 44.444 3.72e-16 77.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1794 09 34675366 34677332 Acco09g1794 09 34675366 34677332 ECH