Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1793 ATGTCTCTCACTGCAGCCGGCGGCAAGCATACTGTTGGCAACAGACTCTCCCGGTTTTCATCCCCGATTGTAGCAATGTCGATTGGAGAGCTTGCTTGCTCTTACGCTGTTGTGCTTCTTCACGACGATGGCATCCCAATCACTGCTGAGAAGATCGCAACGGTGGTGAAGGCAGCTAAAGTTGATATTGAATCTTATTGGCCAAGTTTATTTGCTAAGCTTGCTGAGAAGAGAAACATTGAGGATCTGATCTTGAATTCTGGAGGTGGTGGGGCTCCGGTTGCTGTTGCTGGTGCTCCAGCTGCCGCTGGTGGTGGAGCTGCTCCTGCCGCTGCTCCTGCTGCTGAGGAGAAGAAGGATGAACCCCAAGAAGAGAGTGATGGTGACATGGGCTTCAGCTTGTTTGATTAG 411 0.5134 MSLTAAGGKHTVGNRLSRFSSPIVAMSIGELACSYAVVLLHDDGIPITAEKIATVVKAAKVDIESYWPSLFAKLAEKRNIEDLILNSGGGGAPVAVAGAPAAAGGGAAPAAAPAAEEKKDEPQEESDGDMGFSLFD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1793 136 Gene3D - 26 88 IPR038716 -
Acco09g1793 136 CDD Ribosomal_P1 30 135 - -
Acco09g1793 136 FunFam 60S acidic ribosomal protein P1 25 88 - -
Acco09g1793 136 Pfam 60s Acidic ribosomal protein 47 135 - -
Acco09g1793 136 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 26 136 - -
Acco09g1793 136 Hamap 50S ribosomal protein L12 [rpl12]. 31 136 IPR027534 GO:0003735|GO:0005840|GO:0006414
Acco09g1793 136 MobiDBLite consensus disorder prediction 100 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1793 Acco-ChrAcco09 34650136 34651365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1793 27 136 Cytoplasmic Ribosomal Protein Gene Family AT1G01100 67.273 1.19e-38 125