Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1789 ATGAGTATGCTCTTGGAGAACATGGGTGAAGCGGTTCTGGCTAGTGGTAACAAGGGGATGCTGGACTTGGAAGAGAAGATGAACACGATGAAACAGCTGAAGGATGAGAGCTCCTCAGAAATGGTTAATTGGGACGACCTTCTTCCCCAGATGGTGCTCAGAGTTCTGCTGGTGGAAGCTGATGATTCTACTCGTCAGATTATCGCAGCCCTTCTCCGCAAATGTAGTTACAGAGTTGCTGCGGTTTCTGATGGATTAAAGGCATGGGAAACACTGAAGAAGAAAGCTCCTGATATTGATCTCATATTAACTGACGTGGAGCTGCCGTCAATATCTGGATTTGCACTTCTTTCTGTAATCAAGGAGCATGAAATTTGTAGAAGCATTCCCGTCATAATGATGTCTTCTCATGATTCTATTAGCATGGCAATGAAATGCATCATATTAAAAGGTGCAGCTGACTTTCTTATAAAACCTGTTCGGAGGAATGAACTATCCACCTTGTGGCGACATGTGTGGAGAAGGCATCCTAAAAAACTTGAAGCTACTTCAGAAAACAATGCTGCTAGCAATCATACAACTGGTTCCGTGGCTTCCACACAGAAAAATAATGAGTGCTGCGAGAAAAGGAGGGAGTTCCAAGAAACTTCCCAGCCCAGGAGTCCTTCAAATTTGAGCGACGTTGACACAGTGAAGTATGAAGAATCTGCAAAACTTGAAAGGGACTCTGCTAAACATAATAATGAAACTACGACGAGGTTGATTAGTTATTCATCCGAGGCTGCTAGGTGCAACAGCAATATTTACTTGACAAATTTAAGGCCGGTGCAAGACAATTTTGCTGAAACAGAAAACCAGGATGAATCTTTAAGAGCAGAGTTAAATAGAGACCCTAATGGTGATACAGAGATTCACAGCTGCAATAACGAATTGGTAGAACCTTCTGGAGGAGCTATTGACTTGATTGCTACATTTGAGAATATCCCAAAGAATGCTGATAAGAATTGTAGTCTTGCTGATGGTGGGAAGGACAAGTTTGATTTTGACCTGCAGTTGGAACTTTCCCTGAGAAGTTTTTCTGGTAGCTCATGTAAACAAGAACCTGAAGAAAGGCAAACGTTGACCCATTCAGATGCATCTGCCTTTTCTTGGTATAGTAGTAATAAGTTGCCACAGCCCCTTTTTCCAGCATTGCCAATGAGTTCTGCCAAAGGATATAGTAATGAGCTGAATTCCCAGAATTATACTGAAATATCCGGAATTGATACTTCTTATCGGTATGGCGGGGCAAATCATACTCAGGAGAATACAATCCCACCGGTTCTCCACCAGTCTGGAGAAGTTGGAGCACAATTGCCAAACAGTCATCCTGGATCCTCTACTCTTACTGGCGTTACTTCTGATCACATGTTTAGTAGCTACGAGAATGTTGGGCCTTCTATATTATACACGCAATCGGGTGCTCATCCCACGTGGAGTTCAAAATCAGTCAGCCAGAAAGAGAATTCTCCCTTTCCCGCAACCACTTCATTCCTGTCCAATGCTGAAAGTCACAACTCTGAACAACATAATCATTGGCCTGATGCCAGCTGTGCTTCTCTTGGTAAAGAGACAGGGCGTGATAAAAGCCACTCGGATCTTACAATGCATGATTATCCAGGCGCTCATCAGAATAATGGCGTTAGCTTATGCCGTGACACTCCAAACCATATTAATGATGGTTCTTATGGCAGTATAAGAGAAGGAGATCATACTTCAGCTGTGGTGATCGAGAAAACCCTTGAAAGTTTTGGTGACAATGGTTGTCATGATTATGATGAATACATAGGGGCAGATTCTCTGCGTCCCAACCAGAGGGAAGCTGCTCTAACAAAGTTTCGACTGAAGAGGAAAGACAGATGCTTTGAGAAAAAGGTCAGGTATCAAAGCCGGAAAAGACTGGCTGAGCAGCGTCCTCGGATGAAAGGGCAGTTTGTGCGTCAAGTGCAAAATGATTGTCCAATTGTTGATTCTGGTGGTGGTTCCTGA 2028 0.4329 MSMLLENMGEAVLASGNKGMLDLEEKMNTMKQLKDESSSEMVNWDDLLPQMVLRVLLVEADDSTRQIIAALLRKCSYRVAAVSDGLKAWETLKKKAPDIDLILTDVELPSISGFALLSVIKEHEICRSIPVIMMSSHDSISMAMKCIILKGAADFLIKPVRRNELSTLWRHVWRRHPKKLEATSENNAASNHTTGSVASTQKNNECCEKRREFQETSQPRSPSNLSDVDTVKYEESAKLERDSAKHNNETTTRLISYSSEAARCNSNIYLTNLRPVQDNFAETENQDESLRAELNRDPNGDTEIHSCNNELVEPSGGAIDLIATFENIPKNADKNCSLADGGKDKFDFDLQLELSLRSFSGSSCKQEPEERQTLTHSDASAFSWYSSNKLPQPLFPALPMSSAKGYSNELNSQNYTEISGIDTSYRYGGANHTQENTIPPVLHQSGEVGAQLPNSHPGSSTLTGVTSDHMFSSYENVGPSILYTQSGAHPTWSSKSVSQKENSPFPATTSFLSNAESHNSEQHNHWPDASCASLGKETGRDKSHSDLTMHDYPGAHQNNGVSLCRDTPNHINDGSYGSIREGDHTSAVVIEKTLESFGDNGCHDYDEYIGADSLRPNQREAALTKFRLKRKDRCFEKKVRYQSRKRLAEQRPRMKGQFVRQVQNDCPIVDSGGGS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1789 675 Pfam Response regulator receiver domain 55 167 IPR001789 GO:0000160
Acco09g1789 675 ProSiteProfiles Response regulatory domain profile. 54 173 IPR001789 GO:0000160
Acco09g1789 675 MobiDBLite consensus disorder prediction 183 203 - -
Acco09g1789 675 MobiDBLite consensus disorder prediction 535 549 - -
Acco09g1789 675 MobiDBLite consensus disorder prediction 488 527 - -
Acco09g1789 675 MobiDBLite consensus disorder prediction 488 554 - -
Acco09g1789 675 Coils Coil 20 40 - -
Acco09g1789 675 Gene3D - 51 296 - -
Acco09g1789 675 SMART REC_2 53 169 IPR001789 GO:0000160
Acco09g1789 675 MobiDBLite consensus disorder prediction 180 230 - -
Acco09g1789 675 PANTHER TWO-COMPONENT RESPONSE REGULATOR 53 305 IPR045279 GO:0009736
Acco09g1789 675 Pfam CCT motif 619 661 IPR010402 GO:0005515
Acco09g1789 675 SUPERFAMILY CheY-like 53 184 IPR011006 -
Acco09g1789 675 ProSiteProfiles CCT domain profile. 619 661 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1789 Acco-ChrAcco09 34598974 34603162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1789 618 664 Response Regulator Gene Family AT5G24470 87.234 2.57e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Acco09g1789 Response_reg 1.4e-22 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1789 09 34598974 34603162 Acco09g1789 09 34598974 34603162 ECH