Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1786 ATGGAGAGGCTTCAAGGACCCATCAATTCCTGTTTCGTTGGTGAGTATTTGGGAGTGAACTCTCGATCAGATGAAGAAGAGCTTTTGATATCACTATCGAGTTTAGAGGATAAAATGCCATTTCTTGAGATGCTTCAGAGTGTGGAATCTCAAACCCCACAATTTTTTCCCTTCAAAGATTCCAACTTTCAGTTTCAGACTCTTGTAAACCAGAAGAAACCATGCGAAGAAGAGAGGGAAAGAACAACGTGCTTATCTAGAACAATGGAGACTCAAATTCACGCAGCGCCGGAGCTAGAGAGCTGCGTCACTCACGAAACGGCGGAGGTGCCGTCGTCGCCTTCGCCGGCGAAATCTGGGAACTGCAGGAGAAAAAGGAAGAGATCAACGAGACTTATTAAGAGCGAGGAAGACGTGGAGAATCAACGCATGACCCACATTGCCGTTGAACGCAACCGCCGCCGTCAAATGAACGACCACCTTAGTGTTCTCAAATTACTCATGCCCACTCCCTATATTCAAAAGGGGGACCAAGCGTCCATTATTGGAGGTGCAATAGATTTTGTGAAGGAATTGGAGCAGCTGCATCAATCTCTGGAAGCACAGAAAAGAATAAGAAGGAACGAAGAGATTGGATTCAGCTATGGAACGACGTCGTGCGGAGGAGGAGGAGAATCAAACTTTGGTGAAGAAGTGAAAGCAGAGAACAAGTCAGATATCGCAGAAATAGTAGTAACTGTGATTCAAAACCATGTGAATCTGAAAGTTCAGTGCAAGAGAAGAAGTGGGCAGTTGGTGAAGACCATAATGGGTCTTGAGGATCTTAGGCTAACTATTCTGCACCTAAACATAACATCCTCACAGGCCTCGGTTCTTTACAGTTTCAATCTCAAGATAGAAGAAGAGTGCAAAGTAGTGACAGCAAGTGAAATTGCAGGAGCAGTTCAGGAGTTGTTGAGGTTCATCAATGGAAGCTAG 978 0.4499 MERLQGPINSCFVGEYLGVNSRSDEEELLISLSSLEDKMPFLEMLQSVESQTPQFFPFKDSNFQFQTLVNQKKPCEEERERTTCLSRTMETQIHAAPELESCVTHETAEVPSSPSPAKSGNCRRKRKRSTRLIKSEEDVENQRMTHIAVERNRRRQMNDHLSVLKLLMPTPYIQKGDQASIIGGAIDFVKELEQLHQSLEAQKRIRRNEEIGFSYGTTSCGGGGESNFGEEVKAENKSDIAEIVVTVIQNHVNLKVQCKRRSGQLVKTIMGLEDLRLTILHLNITSSQASVLYSFNLKIEEECKVVTASEIAGAVQELLRFINGS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1786 325 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 192 IPR011598 GO:0046983
Acco09g1786 325 Pfam Helix-loop-helix DNA-binding domain 142 193 IPR011598 GO:0046983
Acco09g1786 325 SMART finulus 147 198 IPR011598 GO:0046983
Acco09g1786 325 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 141 214 IPR036638 GO:0046983
Acco09g1786 325 Coils Coil 189 209 - -
Acco09g1786 325 PANTHER MAX DIMERIZATION, MAD 96 322 - -
Acco09g1786 325 Gene3D - 133 209 IPR036638 GO:0046983
Acco09g1786 325 MobiDBLite consensus disorder prediction 104 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1786 Acco-ChrAcco09 34578562 34580489 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1786 30 324 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G01460 43.312 5.59e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco09g1786 HLH 1.6e-10 No_clan