Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1782 ATGGACGCATACTCTTCCGGAGAAGAATTGGTCGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATAAGTTTCTCGAAGCTCTAAAGCTATATGGAAGAGCATGGCAGCGCATAGAAGAGCATATAGGTACAAAGACTGCTGTGCAAATCAGGAGCCACGCACAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCACTTGTAAAAGGTGTTCCAATTGGACAATCTATTGACATAGACATACCTCCTCCACGACCCAAAAGAAAACCAAGCAATCCTTATCCTCGGAAGACTAGTGCCAGTGCCCAAACATCACATGGCGGAGAAAAGGATGGAAAACTCCTTGTGCCAGTTTCACCTTCACATTGTAAACAAGCACTGGACTTGGAGAAGGAACCACAGCCAGAGGAGGCACCCTGTTCCATTGTTACGTCAGCAGACAAGAGTTCAATGTCAGTGCCACAGAGAAATCCATGCACCTCAAGGGAGTTCATACCTTCAGCAAAAGAATTGATAAGTCAGGATGAAACAGATGAATCTTTTATCACTGCTGAACTAAAAGAAAATAAGAAGTTGGAGATAGATGCTGAAGGGAAACACACAGCACAGAGTAATGGCACAAGTAAAGCTTCTAAGATGGAGGATTCTGATGCTTCTCATGCAAAATTGGTTCATTGTAAGACAACAGATGATCTCAATTGTGCTTTGACAATAGAAGGGATGCAAGGAAATCAGAATTACCCAAGACATGTTCCTGTGCATGTTGTTGATGGGAAACTTGGAACTGGTACTCAAAATCCGTCCCACGATATGTTGTTTCCAGAATCTGTATTTCAGCCTATGGGTGGGGTTAACCGGCAACCTAATATTTTCACCAACGCATCTGCATCAAATGCAAGTGAAAGTCAAAATAACCCGGTGCAATCTTCAATTCATCAATCTTTTCCTGCTTATCCTCCTCCGTTCCCACAAATTCACCAGAATCAAGATCACTACCAATCATTTCTTCAAATGTCCTCCACATTTTCAAGTCTTATTGTCTCCACCCTGCTTCAAAACCCTGCAGCACATGCTGCGGCAAGCTTTGCTGCTACGTTTTGGCCCTATGCGAATATAGAAACTTCTGCAGATTCTCCAACATGCTTGCAAGGAGCCTTTCCATCTAGGCAAATTGGCTCTCCCCCAAGTATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCAACTGCATGGTGGGCAGCCCATGGATTTCTTCCTTTGTGTGCTCCCTTCCATTCGGCTTTTCCTTGCCCTCCAGCATCAGCCACAGCAGTTCCATCCATGGATAATGGTGAAATATCAGCAGCAAAAACAGAGCAAGGTGGTGAAACTGCTCCCCAGACTCTGCAAGATCAGGATCCGAAATACCCAGATGCTCTGCAAGCTCAACAATCAGCTTCTAAGTCACCAGTTATTTTTTCATCAGAGCCAGAGGAAAGTGGAGAAGCTAAGATGGATACTTCATCAAAGGCTACTGATCATGAGAAGAACAAAGCAAATACTGAGCACCTTGATCCTAACGAAATGAAAGGCAGAAAACAGGTTGACCGTTCCTCATGTGGTTCCAATACCACATCCAGCAGCGAGGTAGAGACAGATGCATTAGAGAAGGATGAGAAAGGGAAAGATGAAGACAAAGAACCTGATGCAAACCATTTAGCTATCGACTCCAGAAATCGTCGTTCTAGAAGTGCTTTCAGCCTTCCTGATTCTTGGAAGGAGGTCTCTGAAGAGGGGAGGCTGGCCTTTCAGGCTCTCTTCTCCAGGGAGGTGTTGCCACAGAGCTTTTCTCCTTCACATGACTTGACAGATCAGGATCATCGGATGGACAACTTTGAGGATAACAAGAATAATATGGATAATAAACTAGACAGCATCAACAGATGCGGTTCTGACTGTAGAGGAGTGGCAAAAAACCTGTCATTCCTCAAAAAACAACATGATGAGGAAGAGGTGCTGCTAACCATAGGGCTTGGGCAAGGAAAACTGAAGACTAGTCGAACAGGGTTCAAACCTTACAAGAGATGTTCAATGGAAGCCAAGGAAAACTGGGTTGGAACTAACAGCAACCAAGGTGAAGAGAAAAGTGCCAAGAAAATACGCTTGGAAGCGGAGGCTTCAACTTGA 2196 0.444 MDAYSSGEELVVKTRKPYTITKQRERWTEEEHNKFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQSIDIDIPPPRPKRKPSNPYPRKTSASAQTSHGGEKDGKLLVPVSPSHCKQALDLEKEPQPEEAPCSIVTSADKSSMSVPQRNPCTSREFIPSAKELISQDETDESFITAELKENKKLEIDAEGKHTAQSNGTSKASKMEDSDASHAKLVHCKTTDDLNCALTIEGMQGNQNYPRHVPVHVVDGKLGTGTQNPSHDMLFPESVFQPMGGVNRQPNIFTNASASNASESQNNPVQSSIHQSFPAYPPPFPQIHQNQDHYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANIETSADSPTCLQGAFPSRQIGSPPSMAAIAAATVAAATAWWAAHGFLPLCAPFHSAFPCPPASATAVPSMDNGEISAAKTEQGGETAPQTLQDQDPKYPDALQAQQSASKSPVIFSSEPEESGEAKMDTSSKATDHEKNKANTEHLDPNEMKGRKQVDRSSCGSNTTSSSEVETDALEKDEKGKDEDKEPDANHLAIDSRNRRSRSAFSLPDSWKEVSEEGRLAFQALFSREVLPQSFSPSHDLTDQDHRMDNFEDNKNNMDNKLDSINRCGSDCRGVAKNLSFLKKQHDEEEVLLTIGLGQGKLKTSRTGFKPYKRCSMEAKENWVGTNSNQGEEKSAKKIRLEAEAST 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1782 731 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 717 731 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 85 126 - -
Acco09g1782 731 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Acco09g1782 731 MobiDBLite consensus disorder prediction 554 582 - -
Acco09g1782 731 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Acco09g1782 731 MobiDBLite consensus disorder prediction 480 497 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 539 553 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 704 731 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 153 170 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 502 538 - -
Acco09g1782 731 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Acco09g1782 731 Coils Coil 625 652 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 138 170 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 460 594 - -
Acco09g1782 731 PANTHER SWI/SNF COMPLEX-RELATED 8 613 - -
Acco09g1782 731 MobiDBLite consensus disorder prediction 203 226 - -
Acco09g1782 731 CDD SANT 26 69 IPR001005 -
Acco09g1782 731 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Acco09g1782 731 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Acco09g1782 731 Gene3D - 26 73 - -
Acco09g1782 731 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Acco09g1782 731 SMART sant 23 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1782 Acco-ChrAcco09 34539024 34548279 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1782 Myb_DNA-binding 3.2e-13 CL0123