Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1781 ATGTTAGCTCCTGCTCTTTTTGGATTACTCCTCCTCCTTGCCTGCCTTCCTTTTTCTTGTGGTTCCTTTCAGAACCAAGAAAAGGTACTAGAATCATCCACTAATAATCTGCTTCCCAATTCCTGCAACGAAAAATGTGGGAAACACCATGTTCCTTTTCCATTCTACGTGAACTCGTCATGTGTGTCAATTTCTCATGCTTTCAATCTCTCTTGCTCGAATTCCTCTTCCCTTCTTCTCAGAATCGGTTCAGAAAACTACCCAGTTATTGAATTCTTCCCTGACGGCGTCCTAGTGGACTTCCCAGGCACATTATCATGTCGCCAGTACAATGACCTGAACTCTTTTGGGAAAAGTTTTGTGAGAAACGAACACTTTGGAGTCTCAGTGGAAAACGTCATTGGTCTCTATGACTGTGAAGATTCTTCTCTGTGCAAAGCAGATTGTGAAACAGTTGACTTGCCGGGTTGTGACGGTGACGGAGACGGTGGAGGTGGCTCACTTGGGTGCTGCTATCCACTTTCAGACCATAGTATATGGCATGTAGGAGAAGGGTTTTCAGTGTTTTCTGAGTATGGATGCAGGGGATTTTCTAGTTGGGCTGTTTTGAGAGGATCAAATTCAGGAAAGCGAGGGGTAAAATTGGAATGGGCTGTTCCTAATAACTCATCCAAGCAAGTTTGTTCAAGCAATGCTGAATTAGTGAATGCCACATCAGTTGAAGGTGGAGCAAGGTGTATGTGTCAAGATGGGTATGTTGGTGATGGATTTGCTAATGGAACTGGATGCTTGCAGGCCTGTGTGAAGGATGGACGTGAAGCATATGGTAGTGACTGCTACATCAGAAGAAAAGATCAAAGAAAATTTGTCATGATCGCAGGAATCCTTGGTCCAGTTCTTATTATTGCCTCATTACTAGCACTATTTTGTCTACTTAAAAGACCACAAAGACAAGGCACTTTTGACAAAGAGCAGGCTTACTATCACCATACCTCATCTCAAAAGGCTTGTAGAACTCAGTTGTTTAGCCTCCGCGAGCTAGAGGAAGCAACAAAAGATTTCTCTGAGGATCAGAAGCTCATGCAGAGCAGCAACAATGGTACAATTTTCGCCGGTGTTCTTGGGGATGGATCACATGCAGCTGTCCACAAGTTGCAATATGATACTGAGAAAGACCTTATACAAGTCCTGGCACAAATTGAGGTCCTATCTGCTATTTCACATAAGAACTTGGCCCGCCTTCTCGGATGCTGTATAGATTCTGGCTATCCTTCTGTGGTTGTCTATGAGTATCCTGCAAATGGCACCTTGGAGGACCATTTACATCAAAGAAAGGGACATAAACTTTGTTTGGACTGGAACAAGAGATTAATTATTGCTGCAGAAACAGCTAATGTTCTTGCATTGTTACAATATGACACTTCCCCTCCCATATTCCACCACAACCTTAAACTTGGTTGCATATTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTCAGGCTTGTCAATACCAAATTCAACTATCGCTATGATAACAATATTGAAGGCTTGAATTTCTGCAAGAATGATGTTTATGACATGGGTGTGTTGCTTCTTGAGATCATTTCAGGCTCAAATAATAATCACTTGAACACACCAACCCAGGCACTTCAGAAGATTAGGACAGGGAAGCTCGAAGAAATAATCGATCCCCTTCTCTACTACCACGAGCAAACTCGTTCTTGCCAAGAACAGATACAGATAATAGCGGACCTAGCTACAAGATGTATGTTGTTTGGTTCAGATGGCAAGCTGCAAATGGTTGATGTTGCAAGAGAGTTGACACACATAACAAAAGAGAGTGTTGATGGAGGAATCACAAGAGGTTTGGAAGAGACATTCTCAAATTCTAGCCTTCTTCAGATGATATCAAGGTCTCCTGATTCTATGCTTATGAGTCAGCCAGAACAGGATGCTGAACCTACAGATAGCCGTCCCCGTTTAAACCAAAGGATTCTTTCATCTTTGTCAAGAAGATCAGTTGCTGCTCATCCTTGGCATGATCTTGACATTGGACCTGATGCTCCCAATGTTTTCAATTGTGTTGTGGAGATCACTAAGGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGAATGATCAAGGTTGATCGCATTTTGTATTCATCAGTTGTTTACCCTCACAACTATGGCTTCATACCTCGTACTCTTTGTGAAGATAATGATCCACTTGATGTCTTGATCCTTATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGAGAGCCAGGGCCATTGGACTGATGCCTATGATTGACCAGGGTGAGACCGATGATAAGATTATTGCAGTATGTGTTGATGATCCTGAGTACAAGCACTATACTGACTACAAAGAACTTCCACCTCATCGCCTCTCTGAGATTCGTCGCTTCTTTGAAGATTACAAGAAGAATGAGAATAAGGAGGTAGCAGTTAATGATTTTTTGCCTCCTTCTACTGCCCTTGAAGCCATCCAGTACTCAATGGATCTTTATGCTGAGTATATTCTGCACAGTTTGAAGCAATAG 2574 0.4239 MLAPALFGLLLLLACLPFSCGSFQNQEKVLESSTNNLLPNSCNEKCGKHHVPFPFYVNSSCVSISHAFNLSCSNSSSLLLRIGSENYPVIEFFPDGVLVDFPGTLSCRQYNDLNSFGKSFVRNEHFGVSVENVIGLYDCEDSSLCKADCETVDLPGCDGDGDGGGGSLGCCYPLSDHSIWHVGEGFSVFSEYGCRGFSSWAVLRGSNSGKRGVKLEWAVPNNSSKQVCSSNAELVNATSVEGGARCMCQDGYVGDGFANGTGCLQACVKDGREAYGSDCYIRRKDQRKFVMIAGILGPVLIIASLLALFCLLKRPQRQGTFDKEQAYYHHTSSQKACRTQLFSLRELEEATKDFSEDQKLMQSSNNGTIFAGVLGDGSHAAVHKLQYDTEKDLIQVLAQIEVLSAISHKNLARLLGCCIDSGYPSVVVYEYPANGTLEDHLHQRKGHKLCLDWNKRLIIAAETANVLALLQYDTSPPIFHHNLKLGCIFLDDDFSVKIAGFRLVNTKFNYRYDNNIEGLNFCKNDVYDMGVLLLEIISGSNNNHLNTPTQALQKIRTGKLEEIIDPLLYYHEQTRSCQEQIQIIADLATRCMLFGSDGKLQMVDVARELTHITKESVDGGITRGLEETFSNSSLLQMISRSPDSMLMSQPEQDAEPTDSRPRLNQRILSSLSRRSVAAHPWHDLDIGPDAPNVFNCVVEITKGSKVKYELDKKTGMIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLILMQEPVLPGCFLRARAIGLMPMIDQGETDDKIIAVCVDDPEYKHYTDYKELPPHRLSEIRRFFEDYKKNENKEVAVNDFLPPSTALEAIQYSMDLYAEYILHSLKQ 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1781 857 Gene3D Transferase(Phosphotransferase) domain 1 433 623 - -
Acco09g1781 857 Hamap Inorganic pyrophosphatase [ppa]. 692 848 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Acco09g1781 857 FunFam Soluble inorganic pyrophosphatase 4 675 853 - -
Acco09g1781 857 CDD pyrophosphatase 692 845 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Acco09g1781 857 ProSitePatterns Inorganic pyrophosphatase signature. 743 749 - -
Acco09g1781 857 Gene3D Inorganic pyrophosphatase 675 853 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Acco09g1781 857 Pfam Protein tyrosine and serine/threonine kinase 362 558 IPR001245 GO:0004672|GO:0006468
Acco09g1781 857 ProSiteProfiles Protein kinase domain profile. 355 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1781 857 Pfam Inorganic pyrophosphatase 696 847 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Acco09g1781 857 Gene3D Phosphorylase Kinase; domain 1 327 431 - -
Acco09g1781 857 SUPERFAMILY Protein kinase-like (PK-like) 337 609 IPR011009 -
Acco09g1781 857 Pfam Wall-associated receptor kinase galacturonan-binding 42 91 IPR025287 GO:0030247
Acco09g1781 857 PANTHER INORGANIC PYROPHOSPHATASE 633 856 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Acco09g1781 857 SUPERFAMILY Inorganic pyrophosphatase 673 853 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Acco09g1781 857 Gene3D Laminin 225 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1781 Acco-ChrAcco09 34523796 34531187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1781 33 656 Receptor kinase-like Gene Family AT2G23450 28.111 1.81e-55 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-3 Acco09g1781 PK_Tyr_Ser-Thr 2.6e-14 CL0016