Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1768 ATGCCAACCCCATCAAAATCATCAACAACAAGAAGATCCTATGCCCCTCCTTCATCTTCCATAATTATGGTTATGAGGTTAATGACCTTTTTCACAGTACCATTAGTTCTGTCTTGCCTAGTCGTCACAGTCTCCTCCTCTTGTACCCAGTTGGATAAAGAATCTCTCTTGGACTTCTACAACAATATATCCACAGAACCTCACCCTCCTCTTAATTGGTCGTCTTCTGCTGATTGCTGCTCTTGGGAAGGCATTCTTTGCGATGAGAGCAATATGGGTAATGGGGATCAGAGAGTTATTGGCTTATTGCTTCCATCCAGAAGTCTCACTGGTTCCATATCCCCTGCTCTCACTAATCTCACTGGTCTGTCTCGGCTCAATCTCTCTCATAATCGACTTTCTGGTAATCTCCCAACCCAATTCTTCTCACTCCTTAGTCAGCTGCAGATTATTGATTTAAGCTACAATCGTCTCTCTGATGAGTTGCCAGCACCTGTTTTGAATAATGATAACAAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAATCTGTTTCAAGGAACACTCCCTTCTTCTTTCCTGCAGTACCTTGGAGATGCTGCAGCAGCAGGGACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCACTTCTCAACTTTGCATTAATGACAGTCTCAGATTCTTGGATCTTTCCGACAATAAATTTAACGGTTCAATTCAATCTGGATTGGGAGCATGTTCCAAGCTTGAGATTTTCCGAGCGGGTTTCAATTCTCTCTCTGGGCCTCTTCCTAGTGATCTTTTTGGTGCTGTTTCCCTCAGAGAGATCTCCTTGCCCCTCAATCAACTCTCTGGAAATATTGATGACGGCATTACTGGACTTGCCAACCTCACAGTCCTGGAGCTCTTCTCCAATAATTTCAGAGGACTCATACCACAAGATATTGGGAAGCTATCCAAGCTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTTTACCCCCATCTCTGGTGAACTGTGTCAATCTAGTAGAGTTAAATTTGAGGGTCAACTTCTTGGAGGGGAATCTCGTAGATTTGAACTTCTCCAGATTCCAGCGGCTTGTTACTCTTGATCTTGGCTACAATAATTTCACGGGCACTTTACCAACAACCCTTTATGCATGCAAATCACTGGCTGCGGTAAGACTGGCATCTAATGATCTCGTGGGACAGATCACACCAGATATACTTAGACTTCAGTCTCTGTCTTTCCTATCAATATCTACCAACTACCTAAGAAATTTCACTGGAGCTATGAAGATACTTGCGGGACTCAAGAACCTCAGAAGCCTTGTCCTGGCAAAGAATTTTTATAATGAAACTTTGCCGTATGATGAAAACTTAGTAGTCCCAGGCGGATTTCAAAAACTCCAAGTTCTAGCCTTGGGTGGCTGTAATTTCACCGGTCAAATACCACGCTGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTTTAATCTCATGACCGGTTCAATTCCTCCTTGGTTGGGTAAACTTCCACAGCTATTCTACGTAGACTTGTCTCATAACCAGCTTATAGGAGTATTCCCCGCGGATCCCACAGGATTTCCAGCATTAACATCACAACTGGCAAATGATAGAATAGTAAGGTCTTACCTGGAATTACCTGTCTTCATTGTGCCGCAAAATGCTTCTCAGCAGCAGTATAATCAGCTTTCCAACCTACCACCAGCAATATATCTGGGAAACAATGGTCTCAGTGGCGACATTCCTAAGGAGATTGGCCTAATGAAAGTTCTACTTCAGCTGGACCTGGGTAGTAACAATTTCTCTGGCAGTATTCCTGTTGAAATTTCTAACTTGACTGATTTAGAGAAGTTAGACCTCTCAGGAAACCAACTGTCTGGTGAAATTCCTTCTTCACTCAAAAGCCTCCATTTCTTGTCATTTTTTACTGTGGCAGACAATGATCTTCAAGGAGAGATACCAACGGGTGGCCAATTTGATACTTTCCCTCCTTCCAGCTTTTTAGGAAATCTGCAATTGTGCGGTTCAGTTATACGACGCTCTTGTCATAGTCCACCAAACGATAGCAGAGCCTTGAACAAAAAGACAACCCGGAACAAAAGTAAAATAATTGGAATTGCCATTGCAGTTAGCTTTGCTGTCGTTTGTAGCATCATTGCTTACACAGTCCGGATACTTTTCAAGAGGAGGATCAATCCAAGGGGAGATCCTGATGAGATTGGACAAGAATCAACTTTTGCAGACTACAACGATGGTTTTTTTCCTGAAGTAGATAAGAAGGCTGGCCAAGTGGTAATGTTCCCCAATAAAGCAAATGAAATCAAAGATCTTACTATATCTGAGATCTTGAAAGCCACAGAAAATCTTAGTCTAGCGAACATTATAGGATCTGAGAATTGTGGTTTTGTTTATAGAGCGACCTTACCAGATGGAAATAAACTAGCTATAAAGAAACTTACAGGAGAATCAGGGCTTACGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCCCAACACAAGAATCTGGTTGCGTTGCTAGGCTATTGTGTGTATGATAGCTTTCGGCTTCTCATATATACTTACATGGAAAATGGAAGTCTAGACTATTGGTTGCATGAGAAGGCTGGCACTGCATTTCAACTTGATTGGCCAACTCGACTGAAGATAGCACAGGGAGTGACTTGTGGGTTGGCTTACATGCATCACACATGTGTACCACACATTGTACATCGCAATATCAAGTCGAGCAATATCCTCCTAGATGAAAATTTCGATGCGTTCATTGCTGATTTTGGGTTATCCAGATTGATTCCCCCCCATCAAACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTATATTCCGCCTGAGTATGGACAAGCATCTGAGGCCACTCTTCGGGGAGATGTGTACAGCTTTGGCATTCTCATGCTTGAGTTGATCACCGGGAGGAGGCCTCTTGACATGTGCAAGACAAAAATGCCAATGGAACAGGTTCTTTGGATGCAACAAATGAGGAGTGAAGGAAAACAACATCAAGTCTTCGACCCACTTTTAAGAGGAACGGGCTTTGAAGAGGAGATGCTGCAGGTATTTGATGTGGCTTGCATGTGTGTCAGCCAAAATCATTTCAAGAGACCAAGCATCAGAGAAGTAGTTGATAGGCTGAAGAATGTAGGATCAGCCAAATAA 3273 0.4259 MPTPSKSSTTRRSYAPPSSSIIMVMRLMTFFTVPLVLSCLVVTVSSSCTQLDKESLLDFYNNISTEPHPPLNWSSSADCCSWEGILCDESNMGNGDQRVIGLLLPSRSLTGSISPALTNLTGLSRLNLSHNRLSGNLPTQFFSLLSQLQIIDLSYNRLSDELPAPVLNNDNKTSSIIQELDLSSNLFQGTLPSSFLQYLGDAAAAGTLTSFNVSNNSFIGPIPTSQLCINDSLRFLDLSDNKFNGSIQSGLGACSKLEIFRAGFNSLSGPLPSDLFGAVSLREISLPLNQLSGNIDDGITGLANLTVLELFSNNFRGLIPQDIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVELNLRVNFLEGNLVDLNFSRFQRLVTLDLGYNNFTGTLPTTLYACKSLAAVRLASNDLVGQITPDILRLQSLSFLSISTNYLRNFTGAMKILAGLKNLRSLVLAKNFYNETLPYDENLVVPGGFQKLQVLALGGCNFTGQIPRWLARLRMLEVIDLSFNLMTGSIPPWLGKLPQLFYVDLSHNQLIGVFPADPTGFPALTSQLANDRIVRSYLELPVFIVPQNASQQQYNQLSNLPPAIYLGNNGLSGDIPKEIGLMKVLLQLDLGSNNFSGSIPVEISNLTDLEKLDLSGNQLSGEIPSSLKSLHFLSFFTVADNDLQGEIPTGGQFDTFPPSSFLGNLQLCGSVIRRSCHSPPNDSRALNKKTTRNKSKIIGIAIAVSFAVVCSIIAYTVRILFKRRINPRGDPDEIGQESTFADYNDGFFPEVDKKAGQVVMFPNKANEIKDLTISEILKATENLSLANIIGSENCGFVYRATLPDGNKLAIKKLTGESGLTEREFKAEVEALSTAQHKNLVALLGYCVYDSFRLLIYTYMENGSLDYWLHEKAGTAFQLDWPTRLKIAQGVTCGLAYMHHTCVPHIVHRNIKSSNILLDENFDAFIADFGLSRLIPPHQTHVTTELVGTLGYIPPEYGQASEATLRGDVYSFGILMLELITGRRPLDMCKTKMPMEQVLWMQQMRSEGKQHQVFDPLLRGTGFEEEMLQVFDVACMCVSQNHFKRPSIREVVDRLKNVGSAK 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1768 1090 Pfam Protein kinase domain 816 1081 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1768 1090 SUPERFAMILY L domain-like 208 555 - -
Acco09g1768 1090 FunFam Tyrosine-sulfated glycopeptide receptor 1 372 710 - -
Acco09g1768 1090 Gene3D Ribonuclease Inhibitor 176 273 IPR032675 -
Acco09g1768 1090 Pfam Leucine Rich Repeat 638 659 IPR001611 GO:0005515
Acco09g1768 1090 Pfam Leucine rich repeat N-terminal domain 52 88 IPR013210 -
Acco09g1768 1090 PRINTS Leucine-rich repeat signature 123 136 - -
Acco09g1768 1090 PRINTS Leucine-rich repeat signature 635 648 - -
Acco09g1768 1090 ProSiteProfiles Protein kinase domain profile. 812 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1768 1090 Gene3D Ribonuclease Inhibitor 51 175 IPR032675 -
Acco09g1768 1090 Gene3D Ribonuclease Inhibitor 274 369 IPR032675 -
Acco09g1768 1090 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Acco09g1768 1090 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 272 367 - -
Acco09g1768 1090 Gene3D Transferase(Phosphotransferase) domain 1 888 1090 - -
Acco09g1768 1090 FunFam Leucine-rich repeat receptor-like kinase 52 175 - -
Acco09g1768 1090 SMART LRR_typ_2 302 325 IPR003591 -
Acco09g1768 1090 SMART LRR_typ_2 120 144 IPR003591 -
Acco09g1768 1090 SMART LRR_typ_2 502 526 IPR003591 -
Acco09g1768 1090 SMART LRR_typ_2 375 399 IPR003591 -
Acco09g1768 1090 SMART LRR_typ_2 326 350 IPR003591 -
Acco09g1768 1090 SMART LRR_typ_2 635 659 IPR003591 -
Acco09g1768 1090 SMART LRR_typ_2 145 169 IPR003591 -
Acco09g1768 1090 Gene3D Phosphorylase Kinase; domain 1 778 887 - -
Acco09g1768 1090 SUPERFAMILY Protein kinase-like (PK-like) 795 1083 IPR011009 -
Acco09g1768 1090 FunFam Leucine-rich repeat receptor-like protein kinase 888 1090 - -
Acco09g1768 1090 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 265 436 - -
Acco09g1768 1090 SUPERFAMILY L domain-like 582 686 - -
Acco09g1768 1090 Gene3D Ribonuclease Inhibitor 370 712 IPR032675 -
Acco09g1768 1090 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Acco09g1768 1090 SUPERFAMILY L domain-like 47 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1768 Acco-ChrAcco09 34404768 34408040 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1768 18 748 Miscellaneous Gene Families AT1G17250 49.198 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Acco09g1768 Pkinase 1.6e-38 CL0016