Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1767 ATGTCTGCTTTCTCTCCTTCGTCTTCATCGTCTGGTTCTTCTTGTTCTTCATTTTACATGAAGAAAGATCCCCAATACGACATCTTTCCCTGCGGGGTATCTGTTCTGATGACCCTAGAAGCTTCAAATCACAGACAGAGACCAAACCCATCAACATCAGCTTCTGCAACAAGACCCTCCTCCACCATTATTCTCAGGGATACTACGAGGTTCATGGGCTTTCTCATGGTACCGTTAGTTCTTCTGTCTTGCCTTGTTGTCACGGTCTCCTCTTCTTGTGCCCAATTGGATAAAGAATCTCTCTTGGACTTCTACAACAATTTATCCACAGAACCTCACCCTCCTCTTAATTGGTCTTCTTCTGTTGACTGCTGCTCTTGGGAAGGTATTCTTTGCGACAAGAGCAATATGGGTAATGGGGATCAGAGAGTTATTGGCTTATTGCTTCCATCCAGAAGTCTCACTGGTTCCATATCCCCTGCTCTTACCAACCTCACTGGTCTGTCTCGGCTCAATCTCTCTCATAATCGACTTTCTGGTAATCTCCCAACCCAATTCTTCTCACTCCTTAGTCAGCTGCAGATTCTTGATTTAAGCTACAATCGTCTCTCTGATGAGTTGCCAGCACCTGTTTTGAATAATGATAACAAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAATCTGTTTCAAGGAACACTCCCTTCTTCTTTCCTTCAGTACCTTGGAGATGCTGCAGCAGCAGGAACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTCCAATTCCCACTTCTCAACTTTGCATTAATGACAGTCTCAGATTCTTGGATCTTTCCGACAATAAATTTAACGGCTCAATTCAATCTGGATTGGGAGCATGTTCCAAGCTTGAGATTTTCCGAGCAGGTTTCAATTCTCTCTCTGGGTCTCTTCCTAGTGATCTTTTTGGTGCTGTTTCCCTCAGAGAGATCTCCTTGCCCCTCAATCAACTCTCTGGAAATATTGATGATGGCATTACTGGACTTACCAACCTCACAGTCCTGGAGCTCTTCTCCAATAATTTCAGAGGACTCATACCACAATATATTGGGAAGCTATCCAAGCTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTTTACCCCCATCTCTGGTGAACTGTGTCAATCTAGTAGAGTTAAATTTGAGGGTCAACTTCTTGGAGGGGAATCTCGTAGATTTGAACTTCTCCGGATTCCAGCGGCTTGTTACTCTTGATCTTGGCTACAATAATTTCACGGGCACTTTACCAACAACCCTTTATGCATGCAAATCACTGGCTGCGGTAAGACTGGCATCTAATGATCTCGTGGGACAGATCACACCAGATATACTTAGACTTCAGTCTCTGTCTTTCCTATCAATATCTACCAACTACCTAAGAAATTTCACTGGAGCTATGAAGATACTTGCGGGACTCAAGAACCTCAGAAGCCTTGTCCTGTCAAAGAATTTTTATAATGAAACCTTGCCGTATGATGAGAACTTAGTAGTCCCAGGCGGATTTCAAAAACTCCAAGTTCTGGCCTTGGGTGGCTGTAATTTCACCGGTCAAATACCACCCTGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTTTAATCTCATGACCGGTTCAATTCCTCCTTGGTTGGGTAAACTTCCACAGCTATTCTACGTAGACTTGTCTCATAACCAGCTTACAGGAGTATTCCCCGCGGATCCCACAGGATTTCCAGCATTGACATCACAACTGGCAAATGATAGAATAGTAAGGTCTTACCTGGAATTACCTGTCTTCATTGTGCCGCAAAATGCTTCTCAGCAGCAGTATAATCAGCTTTCCAACCTACCACCAGCAATATATCTGGGAAACAATGGTCTCAGTGGCGACATTCCTAAGGAGATTGGCCTAATGAAAGTTCTACTTCAGCTGGACCTGGGTAGTAACAATTTCTCTGGCAGTATTCCTGTTGAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACCAACTGTCTGGTGAAATTCCTTCTTCACTCAAAAGCCTCCATTTCTTGTCATTTTTTACTGTGGCAAACAATGATCTTCAAGGAGAGATACCAACAGGTGGCCAATTTGATACTTTTCCTCCTTCCAGCTTTTTAGGAAACCCGCAATTGTGCGGTTCAGTTATACAACGTTCTTGTCCTAGTCCACAAGGTAACAGCAGCACAATTCATCGCACTTCGAACAAAAAAATCATGATTGGACTTGTTATCGCAGTCTGTTTGGGCACTGTTGCTATCATGACTGTGTTGGTAATCTGGATACTTTCCAAGAGGAGGATCAATCCAGGGGGAGACCCAGACAAGATTGAACTGGATACAATTTCTGCCCACTCCAATAGTGGAGTTCATCCTGAAGTTGATAAGGAGGCTAGCTTAGTGGTGATGTTCCCCAATAAAACAAATGAAATCAAAGATCTCAACATATTTGAGATCTTAAAAGCCACTGAAAATTTCAGTCAGGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACGTTACCTGATGGAACTAAGCTAGCTATCAAGAAACTTTCAGGAGATTTGGGGCTTATGGAAAGGGAATTTAAAGCAGAGGTAGAGGCTTTGTCAACAGCCCGGCACGAGAATCTGGTTGCATTGCAAGGCTACTGTGTACATGGTGGCTTTCGGCTTCTTATATATTCTTTCATGGAAAATGGAAGTCTGGATTACTGGTTGCATGAGAAGCCTGATGGTGCAACTCAACTTGATTGGCCAACTCGACTGAAAATTGCACAGGGTGCGGGTTGTGGGTTGGCTTACATGCATCAGATATGTGAACCACACATTGTCCATCGTGATATAAAGTCAAGCAACATCCTCCTTAATGAGAAGTTTGAGGCACATGTTGCTGATTTCGGGTTGTCTCGGTTGATTCTTCCATATCACACTCATGTTACCACTGAACTTGTAGGTACATTAGGTTACATTCCCCCTGAGTATGGACAAGCATGGGTTGCCACTCTTAGGGGAGATGTGTACAGCTTTGGGGTTGTCATGCTAGAGCTGCTCACTGGGAGGAGACCTGTTGACATATGCAAGCCAAAAATGTCAAGGGAATTGGTTGGCTGGGTGCAACAAATGAGGAGTGAAGGAAAACAAGACGAAGTTTTCGACCCTCTTCTGAGAGGAAAGGGCTTTGAAGAGGAGATGCTGCAGGTACTTGATGTGGCCTGCATGTGTGTCAACCTGAATCCTTTCAAGAGACCAAGCATCAGAGAAGTTGTTGATTGGTTGAAGAATGTAGGATCAGCCAAACAACAGAATAAAGAGTAG 3417 0.4334 MSAFSPSSSSSGSSCSSFYMKKDPQYDIFPCGVSVLMTLEASNHRQRPNPSTSASATRPSSTIILRDTTRFMGFLMVPLVLLSCLVVTVSSSCAQLDKESLLDFYNNLSTEPHPPLNWSSSVDCCSWEGILCDKSNMGNGDQRVIGLLLPSRSLTGSISPALTNLTGLSRLNLSHNRLSGNLPTQFFSLLSQLQILDLSYNRLSDELPAPVLNNDNKTSSIIQELDLSSNLFQGTLPSSFLQYLGDAAAAGTLTSFNVSNNSFIGPIPTSQLCINDSLRFLDLSDNKFNGSIQSGLGACSKLEIFRAGFNSLSGSLPSDLFGAVSLREISLPLNQLSGNIDDGITGLTNLTVLELFSNNFRGLIPQYIGKLSKLEKLLLHINNLTGTLPPSLVNCVNLVELNLRVNFLEGNLVDLNFSGFQRLVTLDLGYNNFTGTLPTTLYACKSLAAVRLASNDLVGQITPDILRLQSLSFLSISTNYLRNFTGAMKILAGLKNLRSLVLSKNFYNETLPYDENLVVPGGFQKLQVLALGGCNFTGQIPPWLARLRMLEVIDLSFNLMTGSIPPWLGKLPQLFYVDLSHNQLTGVFPADPTGFPALTSQLANDRIVRSYLELPVFIVPQNASQQQYNQLSNLPPAIYLGNNGLSGDIPKEIGLMKVLLQLDLGSNNFSGSIPVEISNLTNLEKLDLSGNQLSGEIPSSLKSLHFLSFFTVANNDLQGEIPTGGQFDTFPPSSFLGNPQLCGSVIQRSCPSPQGNSSTIHRTSNKKIMIGLVIAVCLGTVAIMTVLVIWILSKRRINPGGDPDKIELDTISAHSNSGVHPEVDKEASLVVMFPNKTNEIKDLNIFEILKATENFSQANIIGCGGFGLVYKATLPDGTKLAIKKLSGDLGLMEREFKAEVEALSTARHENLVALQGYCVHGGFRLLIYSFMENGSLDYWLHEKPDGATQLDWPTRLKIAQGAGCGLAYMHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDICKPKMSRELVGWVQQMRSEGKQDEVFDPLLRGKGFEEEMLQVLDVACMCVNLNPFKRPSIREVVDWLKNVGSAKQQNKE 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1767 1138 SUPERFAMILY L domain-like 279 738 - -
Acco09g1767 1138 Gene3D Phosphorylase Kinase; domain 1 817 930 - -
Acco09g1767 1138 Pfam Leucine rich repeat N-terminal domain 97 133 IPR013210 -
Acco09g1767 1138 FunFam Leucine-rich repeat receptor-like kinase 97 221 - -
Acco09g1767 1138 FunFam Leucine-rich repeat receptor-like protein kinase 931 1137 - -
Acco09g1767 1138 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 317 412 - -
Acco09g1767 1138 SMART LRR_typ_2 165 189 IPR003591 -
Acco09g1767 1138 SMART LRR_typ_2 680 704 IPR003591 -
Acco09g1767 1138 SMART LRR_typ_2 420 444 IPR003591 -
Acco09g1767 1138 SMART LRR_typ_2 371 395 IPR003591 -
Acco09g1767 1138 SMART LRR_typ_2 190 214 IPR003591 -
Acco09g1767 1138 SMART LRR_typ_2 571 594 IPR003591 -
Acco09g1767 1138 SMART LRR_typ_2 347 370 IPR003591 -
Acco09g1767 1138 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 310 481 - -
Acco09g1767 1138 Pfam Leucine Rich Repeat 682 704 IPR001611 GO:0005515
Acco09g1767 1138 Pfam Leucine rich repeat 525 584 IPR001611 GO:0005515
Acco09g1767 1138 FunFam Leucine-rich repeat receptor protein kinase MSP1 819 930 - -
Acco09g1767 1138 Gene3D Transferase(Phosphotransferase) domain 1 931 1138 - -
Acco09g1767 1138 SMART serkin_6 855 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1767 1138 ProSiteProfiles Leucine-rich repeat profile. 682 704 IPR001611 GO:0005515
Acco09g1767 1138 ProSitePatterns Protein kinases ATP-binding region signature. 861 884 IPR017441 GO:0005524
Acco09g1767 1138 ProSiteProfiles Protein kinase domain profile. 855 1126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1767 1138 Gene3D Ribonuclease Inhibitor 220 318 IPR032675 -
Acco09g1767 1138 Gene3D Ribonuclease Inhibitor 415 758 IPR032675 -
Acco09g1767 1138 Gene3D Ribonuclease Inhibitor 96 219 IPR032675 -
Acco09g1767 1138 FunFam Tyrosine-sulfated glycopeptide receptor 1 417 755 - -
Acco09g1767 1138 Gene3D Ribonuclease Inhibitor 319 414 IPR032675 -
Acco09g1767 1138 SUPERFAMILY Protein kinase-like (PK-like) 841 1126 IPR011009 -
Acco09g1767 1138 ProSitePatterns Serine/Threonine protein kinases active-site signature. 977 989 IPR008271 GO:0004672|GO:0006468
Acco09g1767 1138 PRINTS Leucine-rich repeat signature 574 587 - -
Acco09g1767 1138 PRINTS Leucine-rich repeat signature 680 693 - -
Acco09g1767 1138 SUPERFAMILY L domain-like 123 340 - -
Acco09g1767 1138 Pfam Protein kinase domain 856 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1767 Acco-ChrAcco09 34383858 34387274 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1767 51 786 Miscellaneous Gene Families AT1G17240 48.784 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Acco09g1767 Pkinase 1.3e-37 CL0016