Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1764 ATGGTGGCTAAAGCCAAACGTTCTTCCCTTCATTTACCAATCTTGCTGATGATCAATTTTTGTCAAACTGTATTAGGACGTTATGAAAAGTCTCTCGTCTCACTGCCACTCTGCCTGCTGGTTGAAGAGGGACCTGAAGCTCCTCACTTCCCCTGTTTTTTGTGGTCCTTTGGGTCTGATCACTTTTCCTCAAACTATAACATGGCTGAGGAACTGGATAAACCATTGCTTGATCCTGAGAGTTTCAATCGCGAGGGTGTTGATTTGGTACGTATGCCATTAGAAGAAGTGTTTGAACAGTTAAGAACATCGCGAAGAGGACTTTCAACTGAAGATGCTGAAGCTAGGCTGTTAATATTTGGCCCTAACAAACTTGAAGAGCAGAAAGAGAATAAAATACTGAAATTTCTGAGTTTTATGTGGAATCCTCTGTCATGGGTTATGGAAGCAGCGGCAATTATGGCAATTGTTCTTGCTAATGGAGGAGGGGAAGGTCCTGATTGGCAAGACTTTGTAGGAATTATATGCCTGCTAGTAATAAACTCAACAATCAGTTTTATAGAAGAAAATAATGCTGGGAATGCCGCGGCATCACTGATGGCTCGTTTAGCTCCTAAAGCAAAAGTTCTTAGAGATGGGCGTTGGCAAGAGCAAGATGCATCTATTTTAGTACCTGGAGATATAATCAGCATAAAGCTGGGAGACATCATCCCAGCTGATGCTCGCCTGCTTGAAGGCGACCCTATTAAAATTGATCAGTCATCTCTCACCGGAGAATCTCTTCCCGTCACCAAGAGGACAGGTAATGAAGTCTTTTCTGGTTCAACTTGTAAGCAAGGTGAGATAGAAGCTGTAGTGATTGCCACCGGAGTTCAGACATTTTTTGGAAAGGCAGCGCACTTGGTTGACAGTACTGAAGTTGTTGGGCACTTTCAGAAGGTCCTAACAGCAATTGGGAACTTCTGCATTTGCTCAATAGCTGTAGGAATGATACTTGAAATCATTGTGATGTTCCCGATACAGCATCGCTCGTATAGGGATGGAATCAACAACCTACTTGTTCTCTTAATTGGAGGAATACCCATAGCTATGCCAACAGTGTTATCTGTTACACTTGCAATTGGCTCTCACAGACTTTCACAACAGGGAGCCATCACAAAGAGAATGACAGCAATTGAAGAAATGGCAGGCATGGATGTCCTATGCAGTGACAAAACCGGAACTCTTACCCTGAATCGCCTCACTGTTGATAGAAGCCTTATTGAGGTCTTTGACAGAAATATGGACAGAGATAAGGCTGTTCTACTAGCAGCCAGAGCAGCTAGACTAGATAACCAGGATGCCATTGATGCAGCCATTGTTAATATGCTATCTGATCCAAAGGAGGCGCGTGCGAATATAACCGAAGTTCATTTTCTTCCTTTCAACCCTGTTGATAAACGTACTGCAATTACATATATTGATTCTGAAGGCAACTGGTACAGAGCCAGCAAAGGAGCTCCTGAACAGATTCTAAGTATGTGCCAAGAGAGAGATGAGATTGCTGGGAAAGTGCATGCAATCATTGACAAGTTTGCTGAAAGGGGCCTGCGATCTCTTGCTGTTGCTTATCAGGAAGTCCCTGAAAAATCTAAGGATAGTCCTGGAGGTCCTTGGACTTTCTGTGGCTTGTTGCCCTTGTTTGATCCTCCAAGACATGATAGTGCTGAGACCATTCGTAGAGCACTTAATCTTGGAGTCTGTGTCAAGATGATTACAGGGGACCAGTTGGCGATTGCAAAAGAAACAGGCCGAAGACTAGGTATGGGGACCAACATGTACCCTTCTTCATCATTGTTGGGTCGTGACAAAGATGAAAATGAAGCTCTCCCAGTAGATGAGCTGATTGAAAAGGCAGACGGCTTTGCTGGTGTATTTCCTGAACACAAGTATGAAATTGTGAAAATCTTACAAGAAAAGGAGCATATAGTTGGAATGACTGGAGATGGTGTAAATGATGCTCCGGCTTTAAAGAAAGCAGATATTGGAATTGCTGTGTCAGATGCTACAGATGCTGCAAGAAGTGCTGCTGATCTAGTCTTAACTGAGCCCGGCTTAAGTGTGATTGTCAGTGCTGTGTTAACCAGCCGATCTATATTTCAAAGAATGAAAAACTATACAATATATGCAGTTTCCATAACCATAAGGATAGTGCTTGGTTTTGTGCTCTTGGCATTGATTTGGGAGTATGATTTTCCACCTTTCATGGTCCTGATCATAGCAATACTGAATGATGGAACTATCATGACCATATCCAAAGACAGGGTAAAACCATCTCCAACACCAGACAGTTGGAAGTTGCCTGAGATCTTTGCAACTGGAATTGTCATTGGCACTTATCTTGCTTTGATCACTGTCCTATTCTACTGGGTCATGGTGAAGACAACTTTCTTTGAGACACACTTTCATGTAACCTCCATATCCAGCGACAGTGAGAAAGTTTCATCTGCTGTGTATCTTCAAGTTAGCATAATTAGCCAGGCTTTAATCTTTGTTACCCGTAGTCGAGGATGGTCTTTTATGGAGAGACCTGGAGTTCTGTTGATGTGTGCCTTTGTAATTGCTCAATTGGTGGCAACCTTAATAGCTGTCTATGCACATATCAGCTTTGCTTATATCACAGGGATTGGATGGGGATGGGCTGGTGTGATATGGTTATATAGTTTAGTCTTTTATATACCTTTGGACATTATCAAGTTCGTTGTGCGCTATGCCTTGAGCGGCGAAGCCTGGAATCTCTTATTTGATAGAAAGACTGCTTTTACTTCGAAGAAAGACTATGGGAAGGAAGATAGAGCTGCAAAATGGATTCTTTCTCAGGAAAGCCTACGAGGATTGAATACCATAAACACGCGGGTTAATGTAAGCAGATCTTCTTTATTGGCAGAACAGGCCAAGCGTAGAGCTGAAATAGCCAGGCTGGGAGAATTGCATACTCTGAGGGGATATGTGGAGTCTGTTATGAGACTGAAAAATTTAGACCAGAGTGTGATCCAATCAGCTTACACAGTTTGA 3054 0.427 MVAKAKRSSLHLPILLMINFCQTVLGRYEKSLVSLPLCLLVEEGPEAPHFPCFLWSFGSDHFSSNYNMAEELDKPLLDPESFNREGVDLVRMPLEEVFEQLRTSRRGLSTEDAEARLLIFGPNKLEEQKENKILKFLSFMWNPLSWVMEAAAIMAIVLANGGGEGPDWQDFVGIICLLVINSTISFIEENNAGNAAASLMARLAPKAKVLRDGRWQEQDASILVPGDIISIKLGDIIPADARLLEGDPIKIDQSSLTGESLPVTKRTGNEVFSGSTCKQGEIEAVVIATGVQTFFGKAAHLVDSTEVVGHFQKVLTAIGNFCICSIAVGMILEIIVMFPIQHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRSLIEVFDRNMDRDKAVLLAARAARLDNQDAIDAAIVNMLSDPKEARANITEVHFLPFNPVDKRTAITYIDSEGNWYRASKGAPEQILSMCQERDEIAGKVHAIIDKFAERGLRSLAVAYQEVPEKSKDSPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGRDKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKEHIVGMTGDGVNDAPALKKADIGIAVSDATDAARSAADLVLTEPGLSVIVSAVLTSRSIFQRMKNYTIYAVSITIRIVLGFVLLALIWEYDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALITVLFYWVMVKTTFFETHFHVTSISSDSEKVSSAVYLQVSIISQALIFVTRSRGWSFMERPGVLLMCAFVIAQLVATLIAVYAHISFAYITGIGWGWAGVIWLYSLVFYIPLDIIKFVVRYALSGEAWNLLFDRKTAFTSKKDYGKEDRAAKWILSQESLRGLNTINTRVNVSRSSLLAEQAKRRAEIARLGELHTLRGYVESVMRLKNLDQSVIQSAYTV 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1764 1017 PRINTS H+-transporting ATPase (proton pump) signature 691 716 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1764 1017 PRINTS H+-transporting ATPase (proton pump) signature 518 536 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1764 1017 PRINTS H+-transporting ATPase (proton pump) signature 660 676 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1764 1017 PRINTS H+-transporting ATPase (proton pump) signature 832 853 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1764 1017 PRINTS H+-transporting ATPase (proton pump) signature 632 648 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1764 1017 Gene3D - 969 1017 - -
Acco09g1764 1017 Gene3D - 414 561 IPR023299 GO:0000166
Acco09g1764 1017 PRINTS P-type cation-transporting ATPase superfamily signature 402 416 - -
Acco09g1764 1017 PRINTS P-type cation-transporting ATPase superfamily signature 660 679 - -
Acco09g1764 1017 PRINTS P-type cation-transporting ATPase superfamily signature 683 695 - -
Acco09g1764 1017 PRINTS P-type cation-transporting ATPase superfamily signature 556 567 - -
Acco09g1764 1017 PRINTS P-type cation-transporting ATPase superfamily signature 578 588 - -
Acco09g1764 1017 PRINTS P-type cation-transporting ATPase superfamily signature 252 266 - -
Acco09g1764 1017 Gene3D - 399 697 IPR023214 -
Acco09g1764 1017 NCBIfam plasma-membrane proton-efflux P-type ATPase 107 878 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco09g1764 1017 PANTHER CALCIUM-TRANSPORTING ATPASE 96 953 - -
Acco09g1764 1017 Pfam Cation transporter/ATPase, N-terminus 92 154 IPR004014 -
Acco09g1764 1017 SUPERFAMILY Calcium ATPase, transduction domain A 205 302 IPR008250 -
Acco09g1764 1017 FunFam Plasma membrane ATPase 414 561 - -
Acco09g1764 1017 ProSitePatterns E1-E2 ATPases phosphorylation site. 404 410 IPR018303 -
Acco09g1764 1017 SFLD p-type atpase 384 711 IPR044492 -
Acco09g1764 1017 SUPERFAMILY HAD-like 398 707 IPR036412 -
Acco09g1764 1017 FunFam Plasma membrane ATPase 205 289 - -
Acco09g1764 1017 Gene3D - 205 289 - -
Acco09g1764 1017 FunFam Plasma membrane ATPase 554 708 - -
Acco09g1764 1017 SFLD C1.7: P-type atpase like 384 711 - -
Acco09g1764 1017 Pfam haloacid dehalogenase-like hydrolase 398 674 - -
Acco09g1764 1017 FunFam ATPase 4 plasma membrane-type 656 887 - -
Acco09g1764 1017 NCBIfam HAD-IC family P-type ATPase 635 745 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1764 1017 NCBIfam HAD-IC family P-type ATPase 174 422 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco09g1764 1017 Gene3D - 167 886 - -
Acco09g1764 1017 CDD P-type_ATPase_H 107 913 IPR006534 GO:0008553|GO:0016020|GO:0120029
Acco09g1764 1017 Pfam E1-E2 ATPase 203 381 - -
Acco09g1764 1017 SMART Cation_ATPase_N_a_2 88 160 IPR004014 -
Acco09g1764 1017 SUPERFAMILY Calcium ATPase, transmembrane domain M 88 919 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1764 Acco-ChrAcco09 34355513 34363984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1764 68 1017 Primary Pumps ATPases AT1G17260 79.895 0.0 1540