Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1753 ATGGGTGACTCGTTAGTGTCTAATGACAAATTGGGCGAATCTCCCGCAGTTGAAGTGACGGGAAAAATCATGGTGCTAGCTATAATAATCCTCTTCATGGTGGTTGTGTTTGTTCTGTTTCTCCATCTCTACGCCAAATGGTTCTGGTGGAGCATTGAAGAAACCACTCCTCCGCCGCCGACTCGCCGTAGACGTCGACGCCGCTTTGTCTTCACCCCTGGGCAAGATCCGGCGATTTACGGCGGCCAGAGAAGTGGGCTTGATCCTTCAGTGCTTTTGTCCTTACCGGTTTTAGTGTACCAACCTGAAAATTTCAAAGATGGTTTGGAATGTGCTGTTTGTCTCTCTGAGCTCGTTGAAGGAGAAAAGGCGAGGCTTTTACCCAAATGTAATCATGGGTTTCATGTGGATTGTATAGATATGTGGTTTCAATACCATTGTACTTGTCCACTTTGCAGAGACCCAGTTGCTTCTGAAACCCCTAAATGCAATAGCACTTCAAGTGTCCGAGAAAATTCCGCAGAGAATATTGGTAGCCAATCACAAGCGGTAGAAAATTTTCAAAACCCAGGTTTAGCTGCTATGAGTGGTTCAGAGTCTCCAAATTTTCCAACTAATGTGTTGGTTTGGGGGAACCAGACTCAAGTTTGTTCTATTAATACATCTTCGGAAGAAGAGGGTCCTTCATCTTCTTCTACAACCACAGCTAGTAGTAGCAGTAACAGTAACAACAATAGACGCCATGAAATGATGGTGATTGATATACCAACTGAGGTCAATTCTTCATCTTTATCTCCTTCTGCAAGCAGGTTTGCTGAAGATGAGCTGAAATCACCAATGACCACAAGATTGAGGTCACTGAAGAGGCTTTTAAGCAGAGACAAAAGGTTAGGTCCTTGTAATCCTGGTCCTGGCTCTATAGATGTTGAGCAAGCAGGGAGAGGACAGAGCTAG 954 0.4465 MGDSLVSNDKLGESPAVEVTGKIMVLAIIILFMVVVFVLFLHLYAKWFWWSIEETTPPPPTRRRRRRRFVFTPGQDPAIYGGQRSGLDPSVLLSLPVLVYQPENFKDGLECAVCLSELVEGEKARLLPKCNHGFHVDCIDMWFQYHCTCPLCRDPVASETPKCNSTSSVRENSAENIGSQSQAVENFQNPGLAAMSGSESPNFPTNVLVWGNQTQVCSINTSSEEEGPSSSSTTTASSSSNSNNNRRHEMMVIDIPTEVNSSSLSPSASRFAEDELKSPMTTRLRSLKRLLSRDKRLGPCNPGPGSIDVEQAGRGQS 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1753 317 CDD RING-H2_EL5-like 110 153 - -
Acco09g1753 317 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Acco09g1753 317 SUPERFAMILY RING/U-box 94 159 - -
Acco09g1753 317 MobiDBLite consensus disorder prediction 276 295 - -
Acco09g1753 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 158 IPR013083 -
Acco09g1753 317 FunFam RING-H2 finger protein ATL3 80 158 - -
Acco09g1753 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 20 275 - -
Acco09g1753 317 SMART ring_2 111 152 IPR001841 -
Acco09g1753 317 MobiDBLite consensus disorder prediction 220 317 - -
Acco09g1753 317 Pfam Ring finger domain 110 153 IPR001841 -
Acco09g1753 317 MobiDBLite consensus disorder prediction 220 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1753 Acco-ChrAcco09 34247650 34248603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1753 1 295 C3H Transcription Factor Family AT1G53820 42.444 2.01e-67 211