Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1748 ATGTGTAACGGATCTCATGACGTCTCTGTGGGTGGACACTTCGTCGGTCAAGCCGGGTTCGGCGGTGATGGTGGAGAACCAGGGTTCAGGTGGAACTCCGGCAACAATGCTGACTATGGCGGAGACGAGGAGCAGATCGCGAGTAGTGTGGAGGGTGATGAAGAAGAGCTTCTTCTTCTTCTTCGGGACATGGTTGAGTTCAGAGTTAGACAAGAGAGAGGGAGAGAAGAGTGTCCAAATGTCATACATTTTGAAGGTGATGTACTGTCCATTTGGACCAGCAGGCAGGCATTGTCATCATCTTCTTCACCGTCTTTATATATAAAATGCAACCAATCCCAAAAGCATGGCAATCCAAAACCAGAAGAAAATAATTTCATAATGGCGATGCATTCTGTGAACTCCTTCAACCGTTACGGTAAGCCAGATGAAGCCGAGAATCAACTTTTTCGTCAGAAGACACGTAAGCGCATGATCATCCTCACCCTCTCCTCCATAGTTCTCGGCGTCCTGGTCGTGGCCGCTGTCGTGGGAACCCTCATCCACAAGCATGACACCCCCTCCTCTTACTCCGCCCCTTCTTCTCCTGAGTTAACTCCGGCCGCCTCAATCAAAGCCGTCTGCGACGTCACTCTCTACCCTAACTCATGCATCTCCGGCATTTCCTCCCATCCTAGTTACTCCAACACCACCGACCCCGAAACGCTCTTCAAGTTCTCTCTCAGCGTCGCCATTGACGAGCTCTCGAAGCTCGCGGCCTACCCTGCGAAGCTCAGAGGCAGAGTAAAGGACCAAAGTATACAGACGGCCCTCGACGTCTGTGGAAATGTTCTAGAAGATGCAGTGGATCGGCTTAACGACTCGATTTCATTGGTGAAAGTCGGAGGAGGCGAGGCGATTCTAACGCCGGCGAAGATCGACGACCTTAGGACGTGGCTGAGCGCCACGATTACGGATCAGGAGACTTGTTTGGACGCCATTGAGGAGTTGAATTCCACCGATGCTCAAGAGATTTTTCGTAATGTGAGAACCGCTATGGAGAACTCTACAGAATCTTCGAGTAATAGTTTGGCCATTGTTACGAAGATACTTCGGGTACTTGCGAGGGTTCACCTCCCGCTACATCGGAGGCTACTCGGGTCGGATTACCCCGAGTGGGTTGGCCCGACAGAGCGGAGGCTGCTGCAGCAAGAGGCGAACAGAACGACGATGGCAGATGCAGTGGTGGCGAAGGACGGAACTGGACAGTACAGGACGATCAATGAGGCGGTGGCGGCCGTGAAGAAGAAGAGTGAGAATATATTTGTGATTTATGTGAAGGAAGGTGTTTACGTGGAAAATGTAGAATTGAAGAAGGACATGTGGAATGTGATGATTATCGGAGACGGGAAAAACAAAACCGTAATCTCCGGCAGCCGGAATAGTGTTGACGGCGTACCCACTTTTGACTCTGCCACTTTCGCTGTAAGCGGGAAGGGATTCATAGCTAAAGACATCGGATTCGTCAACAATGCAGGGCCGGCCAAACACCAAGCGGTGGCGATGCGATCAGGCTCCGACAAGTCGGTGTTCTACCGATGCTCCTTCGATGCCTTCCAGGACACCCTCTACGCCCATTCTAACCGTCAGTTCTACCGGGAATGCGACATCACCGGCACCGTCGACTTCATATTCGGCAACGCAGCTTCAGTTTTCCAGAACTGCACCCTCAAACCCAGAGAGCCACTTCCTGGCCAGTTCAACACCGTCACAGCTCAGGGAAAGACTGATCCAAATCAGAACACTGGCATTGTAATCCATGACTCTTCAATTTCTGCGCTTGATAATCTCACAGCTTCCACCTACCTTGGAAGGCCTTGGAAAAATTACTCTACCACCGTTATAATGAAGTCTGATATTGGGCCTTTCTTGGACCCGATGGGCTGGGTCGGATGGGACACTGATGTGAAGCCACCCAGCACTATTTTTTATGCTGAGTACCAGAATACTGGGCCGGGCTCAAATGTGACCCAGAGGGTTAGATGGGCCGGATATAAGGCCAAACTCTCGGAAGATGAGGCTAGGAAGTTCTCGGTTGGGTCATTTATCCAGGCGAGTCAGTGGCTGCCTGATACAGGCGTGGAATTTCAGTCCTCGTTATAA 2142 0.5117 MCNGSHDVSVGGHFVGQAGFGGDGGEPGFRWNSGNNADYGGDEEQIASSVEGDEEELLLLLRDMVEFRVRQERGREECPNVIHFEGDVLSIWTSRQALSSSSSPSLYIKCNQSQKHGNPKPEENNFIMAMHSVNSFNRYGKPDEAENQLFRQKTRKRMIILTLSSIVLGVLVVAAVVGTLIHKHDTPSSYSAPSSPELTPAASIKAVCDVTLYPNSCISGISSHPSYSNTTDPETLFKFSLSVAIDELSKLAAYPAKLRGRVKDQSIQTALDVCGNVLEDAVDRLNDSISLVKVGGGEAILTPAKIDDLRTWLSATITDQETCLDAIEELNSTDAQEIFRNVRTAMENSTESSSNSLAIVTKILRVLARVHLPLHRRLLGSDYPEWVGPTERRLLQQEANRTTMADAVVAKDGTGQYRTINEAVAAVKKKSENIFVIYVKEGVYVENVELKKDMWNVMIIGDGKNKTVISGSRNSVDGVPTFDSATFAVSGKGFIAKDIGFVNNAGPAKHQAVAMRSGSDKSVFYRCSFDAFQDTLYAHSNRQFYRECDITGTVDFIFGNAASVFQNCTLKPREPLPGQFNTVTAQGKTDPNQNTGIVIHDSSISALDNLTASTYLGRPWKNYSTTVIMKSDIGPFLDPMGWVGWDTDVKPPSTIFYAEYQNTGPGSNVTQRVRWAGYKAKLSEDEARKFSVGSFIQASQWLPDTGVEFQSSL 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1748 713 FunFam Pectinesterase 400 713 - -
Acco09g1748 713 FunFam Pectinesterase 200 364 - -
Acco09g1748 713 Pfam Pectinesterase 406 698 IPR000070 GO:0030599|GO:0042545
Acco09g1748 713 PANTHER PECTINESTERASE 168 703 - -
Acco09g1748 713 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 204 364 IPR035513 -
Acco09g1748 713 Gene3D - 400 713 IPR012334 -
Acco09g1748 713 CDD PMEI-like_3 206 346 - -
Acco09g1748 713 ProSitePatterns Pectinesterase signature 2. 550 559 IPR033131 -
Acco09g1748 713 Pfam Plant invertase/pectin methylesterase inhibitor 203 359 IPR006501 GO:0004857
Acco09g1748 713 Gene3D Invertase/pectin methylesterase inhibitor family protein 201 363 IPR035513 -
Acco09g1748 713 SUPERFAMILY Pectin lyase-like 405 710 IPR011050 -
Acco09g1748 713 ProSitePatterns Pectinesterase signature 1. 431 450 IPR018040 -
Acco09g1748 713 SMART PMEI_2 199 359 IPR006501 GO:0004857
Acco09g1748 713 NCBIfam pectinesterase inhibitor domain 193 363 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1748 Acco-ChrAcco09 34177613 34183204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1748 130 712 Carbohydrate Esterase AT1G53840 55.966 0.0 654