Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1735 ATGTGTGGAGGTGCTATTATCTCCGACTTCATTCCGGCGGCGGCGGTTGCGGCGGCCGGGAGAGGAGGTGGAAGGGCTCGAAGGCTCACAGCCGATTACCTGTGGCCCGATTTGAAGAAGATTGGGTCTGATAGGAGGTTTTCCAAGCCACTGAAGCCTGAAACTGTCATCGACTTGGACGATGATTTTGAAGCTGATTTCAGGGAATTCAAGGACGATTCCGATATCGATGTAGATGAAGATGATGTTGATGTCAAACCCTTTGCTTCTTCCGCCATTAAGCCCTCTAAGAAGCCCCTGTCTTGTGGATCTGCTGCTGCAAAACCTGAGAAATCCGATGAGCAAGCTGAGAAGTCTTTGAAGAGGGGGAGGAAGAACCAATACAGGGGTATCCGCCAGCGCCCATGGGGTAAATGGGCGGCTGAGATCCGTGACCCAAGAAAGGGAGTTCGTGTCTGGCTTGGAACCTTCAACACTGCTGAAGAAGCTGCAAGAGCCTATGATGCTGAGGCAAGAAGGATCCGTGGCAAGAAAGCAAAAGTCAACTTCCCTGATGAGGTCCCATCAGGCCCTTCATCAAAGCGTCTCAAGACCAAAGTTGAGAAGCCACTTCCAAAGGCCAATCTGAACTCTGTTCAGCCAAACTTCACCCAAAACTTCAATGTTGGAAACAATCTGGAGGACTATTACTACTCTATGGGTCTGATGGAACAGAAACCACAGATTAACCAGTTTGCTGCTGCTGCTAACATGGGATCCTTCCCTGAGACTAACGTTAACAACGTGGTCCCATCACTTTCGTCACCTGATGATGTCACTGTTTATTTCAGCTCTGATCAGGCAAGCAACTCATTTGAGTACTCAGACTTTGGATTTGGGGAACAGGCTCCAAGGACCCCAGAAATCTCATCCATGCTTTCTGGTGAATCTCAGTATCTGCAAGATTCAAACCACAACACCTCTGCCAACAACATGATGCAATACTCAGACTCTGAGATTGTGGTCCCTGCCGGAAATGGTTCCGGAAAGAGTCTGTCGGATGAACTTGCTGACATTGAATCCCAACTGAAGTTCTTTGAGGCACCGTACCTTGAAGGAAGCTGGGATGATGCTTCACTGGGAAGCCTGCTTGGTGGAGACACAACACAGGATGCTGCAAATAACCCACTGAACCTCTGGAGCTTTGATGACCTTCCCCCATCCACGATGGGGGGAGTTTACTGA 1224 0.4935 MCGGAIISDFIPAAAVAAAGRGGGRARRLTADYLWPDLKKIGSDRRFSKPLKPETVIDLDDDFEADFREFKDDSDIDVDEDDVDVKPFASSAIKPSKKPLSCGSAAAKPEKSDEQAEKSLKRGRKNQYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDAEARRIRGKKAKVNFPDEVPSGPSSKRLKTKVEKPLPKANLNSVQPNFTQNFNVGNNLEDYYYSMGLMEQKPQINQFAAAANMGSFPETNVNNVVPSLSSPDDVTVYFSSDQASNSFEYSDFGFGEQAPRTPEISSMLSGESQYLQDSNHNTSANNMMQYSDSEIVVPAGNGSGKSLSDELADIESQLKFFEAPYLEGSWDDASLGSLLGGDTTQDAANNPLNLWSFDDLPPSTMGGVY 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1735 407 Gene3D AP2/ERF domain 126 185 IPR036955 GO:0003700|GO:0006355
Acco09g1735 407 PRINTS Ethylene responsive element binding protein signature 150 166 IPR001471 GO:0003700|GO:0006355
Acco09g1735 407 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Acco09g1735 407 PANTHER DNA-BINDING DOMAIN 98 280 IPR044808 GO:0003700|GO:0009873
Acco09g1735 407 MobiDBLite consensus disorder prediction 300 317 - -
Acco09g1735 407 FunFam Ethylene-responsive transcription factor 2 126 185 - -
Acco09g1735 407 ProSiteProfiles AP2/ERF domain profile. 127 184 IPR001471 GO:0003700|GO:0006355
Acco09g1735 407 Pfam AP2 domain 127 176 IPR001471 GO:0003700|GO:0006355
Acco09g1735 407 SMART rav1_2 127 190 IPR001471 GO:0003700|GO:0006355
Acco09g1735 407 SUPERFAMILY DNA-binding domain 127 186 IPR016177 GO:0003677
Acco09g1735 407 MobiDBLite consensus disorder prediction 110 124 - -
Acco09g1735 407 MobiDBLite consensus disorder prediction 93 128 - -
Acco09g1735 407 MobiDBLite consensus disorder prediction 298 317 - -
Acco09g1735 407 CDD AP2 127 185 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1735 Acco-ChrAcco09 34042742 34045101 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1735 1 407 AP2-EREBP Transcription Factor Family AT1G53910 44.787 6.79e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco09g1735 AP2 2.1e-12 CL0081