Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1721 ATGGCGAATGGAGAAGAAAAAGGCAATGACTTCTATGCGATTATGGGATTGGATAAGGAGTGCACAGAATCAGAGCTCAGAAATGCTTATAAGAAACTCGCAATGAAATGGCACCCTGATCGTTGTTCTGCGTGGGGGAATTCAAAGTTCGTGGAAGAAGCTAAGAAGAAATTCCAAGCAATTCAGCAAGCCTATTCTGTTTTATCTGATGCGAATAAGAGGTTCTTGTATGACATAGGAGTCTATGACAGCGATGATGACGACATTGGGATGGGAGAATTCTTGAACGAAATGGCGGCTATGATGACCCAAACTCAACCAAATGAAAATGGGGAAGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAGATATGCTTCAAGGTGACATTGGAATATCTGGAAGTGACTCCCACTCTGTTGCCTCTAGTTCTACATCGTCTACGTACGTTTCCTACTCCTCTGAAACTTCTGGTTGCAACAAGCGCAATTCGTCCGAGATGAATGCTGGGAAGAATGCAGATTCTTCTGCTCACTTTGAAGCCACCTTCCAGGATTTCTGTCTAGGGACAGGTGGATCAGCGGCAAGACATAAAGAAGGGAGGAGGAGGAGGAGTACGAGGAACAGGTAG 630 0.4492 MANGEEKGNDFYAIMGLDKECTESELRNAYKKLAMKWHPDRCSAWGNSKFVEEAKKKFQAIQQAYSVLSDANKRFLYDIGVYDSDDDDIGMGEFLNEMAAMMTQTQPNENGEESFEELQQLFEDMLQGDIGISGSDSHSVASSSTSSTYVSYSSETSGCNKRNSSEMNAGKNADSSAHFEATFQDFCLGTGGSAARHKEGRRRRSTRNR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1721 209 CDD DnaJ 10 70 IPR001623 -
Acco09g1721 209 Pfam DnaJ domain 10 78 IPR001623 -
Acco09g1721 209 MobiDBLite consensus disorder prediction 190 209 - -
Acco09g1721 209 MobiDBLite consensus disorder prediction 149 173 - -
Acco09g1721 209 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Acco09g1721 209 Gene3D DnaJ domain 7 138 IPR036869 -
Acco09g1721 209 SMART dnaj_3 9 73 IPR001623 -
Acco09g1721 209 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Acco09g1721 209 PANTHER PUTATIVE, EXPRESSED-RELATED 2 182 - -
Acco09g1721 209 PRINTS DnaJ domain signature 30 45 IPR001623 -
Acco09g1721 209 PRINTS DnaJ domain signature 12 30 IPR001623 -
Acco09g1721 209 PRINTS DnaJ domain signature 53 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1721 Acco-ChrAcco09 33892442 33895720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1721 12 78 C2H2 Transcription Factor Family AT1G74250 41.176 1.39e-09 55.5