Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1718 ATGGCCCATTCTTCCATGGATTTTGTGTCGTCCTACTCCTCCATCTCAGCTCCCAATTCACGTCGCTACTACCCATCTCTCGCAAACTCTTTCAACGACTCTTTCTCCTTCACAGCCTCCACCTCTCACGCCGACATAAGAGCTCCTCCTGCCTCACCGATTCATTCAAATCATGAACATTCTTGGAGAGAAGAAATTTCATGGCAGGTTGAGCTCAATGAGAGTCACAACTACCCTAAAACCCTTGGCTCTGCTCTGAGTCCATGGCGTTGGAGCTCCCCGTCACCTTCAAGTCTCAGCCAGACATGTCGTCGAACACCTAACGACCATCACCTACCTCGAACGCCCGAAAATGGGAAACTCGAGCTTCGGAGCTACGCTGCGAGTGAAAGTGAGATGGGTTATAACAGTGAGAGTGATGATGATGAGAAGGAGAAGGTTTCAGTAAGAAGAAGAGTGGGGTTGATGGGGTTGTTTAGGTACTCAACAAAGTGGGATATGGTGGTAGTGATGGTGGGGTGTGTTGGGGCAATCATTAATGGCGGATCACTGCCATGCTATTCGTATCTGTTTGGTGAGTTGGTCAATAAGATTGCTTCTGAAGCAATCGCCGGCAACAAAACCCAGATGCTCAGGGACGTCCAACAGGTGTGCCCATATATGGTCGGGTTAGCTGCAGTGGTGCTAGTAGGAGCTTATCTAGAGATCACATGTTGGAGGTTGGTGGGGGAAAGATCTGCTCAGAGAATAAGAAGAGAGTATTTGAAAGCAATTCTTAGGCAAAACATTGCCATTTTTGACACAGAGATGAGCACTGGTGATATCATGCATGGAATTGCAAGTGATGTTGCTCAAATTCAGGATGTCATGGGAGAGAAGATGGCTCATTTCATTCATCATATATTTACATTCATTTGTGGGTACACAGTTGGGTTTCTAAGGTCATGGAAGGTCTCTCTGGTGGTTTTATCAGTCACCCCTCTCACTCTTTTCTCTGGCATAGCCTACAAAGCCGTTTATGGAAGTCTAACAGCAAAAGAGGAAGCTTCATATAGGGAAGCAGGAAGCATAGCAGAGCAGGCCATAAGATCAATCAGGACAGTGTTTGCTTTTGTGGCAGAAGGTCAAATGGGTTCAAAATACAGAGAAGTACTGCAAAAATCAGAGGCATTTGGGGCGAAGGTAGGGTTTGCAAAAGGTGGAGGCATGGGATTAATCTATTTAATAACCTACTCAACATGGGCATTGGCTTTCTTGTATGGCTCCTTCTTAATTGCCAGAAATGAGATTGATGGAGGTGCAGCTATTTCTTGTTTCTTTGGTGTTAATATTGGAGGAAGAGGCTTGGCACTGGCACTTTCATATTATGCACAATTTGCACAAGGCACTGTTGCAGCAAGTCATGTATTTGAAATGATAGAGAGAATTCCTGAGATTGATCCATACAGCTCTGAAGGAAAGAAGCTTTCCAATGTTAATGGAATAATTGAGTTCAAGAATGTCAGCTTTGCATACCCTTCTCGTCCTGATGCTCCCATTCTTCAGTCCCTTAACCTAGTCATTTCTTCTGCAACAACCCTAGCCTTGGTTGGCCCCAGTGGAGGAGGCAAGTCTACCATCTTTGCTCTCATAGAGAGGTTTTATGATCCCATTGAAGGGGTAATAACCTTGGATGGTTTTGATTTGAGAAACTTTCAAGTCAAATGGCTAAGAGATCAAATTGGAATGGTAGGTCAGGAGCCAATTCTTTTTGCCACAACCATACTTGAGAATGTCATGATGGGAAAAGAGAATGCCACTAAGGAAGAGGCAATTAATGCTTGCATTGCTGCTGATGCCCACAGCTTTATCTCTAGCCTACCACTTGGCTATTACACCGAGGTTGGGGATAGGGGAACCCAACTCTCAGGAGGTCAAAAACAGCGAATTGCAGTGGCTCGAGCCATGATTAAAAATCCTAAATTACTACTCTTAGATGAACCTACCAGCGCGCTTGATGTTGAGTCGGAGTCTATAGTCCAAAAAGCCATCGACAAGATTTCTGCTGGCCGGACCACCATTGTTATTGCTCACAGGATTGCAACAGTAAGGAACGCTCACACCATTGTAGTTCTTGAATGTGGTTCTGTGACTGAGATTGGTGATCATCACCAGCTTATGAGAAAAGCTGGCACATATTATAATCTCATCAAGCTTGCTTCTGATGATTCTGATCCTACTTCAAAACCTAGGCCTGAAGAGGATGTCACACAAAAGGCTAATGACTTTTCTGTCTATGAGAAATCATTTTCTGATATCTCAAGGTTCACTTCTAAGTACTCAATGTCCATGCATGAAGAAGAGCTAGAAGATATGGATCATATAAAAAATAAAAATCCAAGAAAGTTCAAACTCTATGAGATATGGAAACTGCAAAAGCCAGAGCTTGTGATTCTATTGTTGGGATTCCTTCACGGTATGTTTGCAGGTGCTTTCTTGTCCCTTTTCCCCTTGATTTTAGGCATGGCGCTTGAAGCATATTTTCATGAAGACACTTCAGAGATGAGAAGAAATGTTGGTCACCTTTGTCTAGCACTTGTTGGTCTTGGTTTTGGATGCATCATCTCCATGACAGGACAACAAGGCTTGTGTGGCTGGGCTGGCACAAAACTCACATTAAGGGTTAGCGACTTTCTTTTCCAGGCCATATTAAAACAAGAACCAGGATGGTTTGATTTCGAAGAAAACTCCACTGGCGTGTTAGTTTCAAGGCTGTCCATTGATTGTGTTAGCTTCCGTTCAGTTCTTGGTGATAGATTTTCTGTCCTTTTAATGGGGTTAAGTTCAGCTGCCGTAGGGTTTGGTGTATCCTTTTCCCTTGAATGGAGATTGGCCCTTTTGGCTGCTGCTTTGGCCCCATTTACTCTTGGTGCTAGCTACTTAAGTTTGATCATAAACATAGGGCCAAGAGTTGATAACAATTCTTATGCCAGAGCTAGTAGTATTGCTTCTGGTGCAGTTTCAAACATAAGGACAATCACAACTTTATCTGCCCAAGAACAAATAGTAACGTCCTTTGATCAAGCCTTGTTAGAGCCTAGGAAAAAATCTGTAAAGAAGTCACAATTTATCGGCCTAACGCTTGGGATTTTTCAAGGAGCCATGTATGGAGCATACACATTAATTCTTTGGTTTGGCGCCTACCTTGTGAAACAGAACAAAACAGAATTTGGAGATGTTTACAAGATCTTCCTCATTCTTGTTTTGAGCTCATTTTCTGTGGGACAACTAGCAGGCTTAGCACCAGATACTTCCATGGCAGCTACAGCAATTCCTGCAGTTCTAGATATCATAGACCGTAGGCCATTAATAGGCGATGATAGAACAAAGGATAAGAAGATAGAAAAATCAAGATCAAAGTCATTGGAGATAGAGTTCAATAAGGTGACATTTTGTTACCCATCTAGGCCTCAGGTGATTGTATTGAAGGATTTCAATTTGAAGGTGAAAGCAAGAAGCAAAGTGGCTTTAGTGGGGCCAAGTGGGTCAGGAAAATCAACAGTGATATGGATGATACAGAGATTCTATGATCCAAATGAAGGGAAAGTGATGATTGATGGGTTGGATTTGAGAGAGATTGATGTAAAATGGTTGAGGAGACAAATGGCTTTGGTGAGTCAAGAGCCTGCACTTTTTGCTGGGAGCATTAGGGAGAATATTGCCTTTGGGAATGTAAATGCTACGTTCACAGAAATTGAAGAGGCTGCAAGGAAAGCACAAGTTCACAATTTCATTAGTGGCCTTCCTCAAGGTTATGAAACCCAGGTGGGTGAGAGTGGGGTCCAGTTATCAGGAGGGCAAAAGCAAATGATAGCAATAGCAAGAGCCATACTGAAGAGATCAAGGGTGTTATTGCTTGATGAAGCAAGCAGTGCCTTGGACTTAGAGTCAGAGAAACTTATTCAAATTTCCCTAAGAAATGTGGCAAAAGAAGCAACCACCATAGTGGTGGCTCATCGTCTACCTACAATCAGAGAAGCTCAATTTATTGCAGTTATGGAAGATGGTACTGTGGTGGAGTCTGGTAGCCATGAAACTCTCATGGCTTCCCATGGTGATGGTTTGTATGCTAGCTTTGTTCGTGCTCAGACTCAGGCCAATGCCTTTTCTGCTTCATAG 4158 0.4322 MAHSSMDFVSSYSSISAPNSRRYYPSLANSFNDSFSFTASTSHADIRAPPASPIHSNHEHSWREEISWQVELNESHNYPKTLGSALSPWRWSSPSPSSLSQTCRRTPNDHHLPRTPENGKLELRSYAASESEMGYNSESDDDEKEKVSVRRRVGLMGLFRYSTKWDMVVVMVGCVGAIINGGSLPCYSYLFGELVNKIASEAIAGNKTQMLRDVQQVCPYMVGLAAVVLVGAYLEITCWRLVGERSAQRIRREYLKAILRQNIAIFDTEMSTGDIMHGIASDVAQIQDVMGEKMAHFIHHIFTFICGYTVGFLRSWKVSLVVLSVTPLTLFSGIAYKAVYGSLTAKEEASYREAGSIAEQAIRSIRTVFAFVAEGQMGSKYREVLQKSEAFGAKVGFAKGGGMGLIYLITYSTWALAFLYGSFLIARNEIDGGAAISCFFGVNIGGRGLALALSYYAQFAQGTVAASHVFEMIERIPEIDPYSSEGKKLSNVNGIIEFKNVSFAYPSRPDAPILQSLNLVISSATTLALVGPSGGGKSTIFALIERFYDPIEGVITLDGFDLRNFQVKWLRDQIGMVGQEPILFATTILENVMMGKENATKEEAINACIAADAHSFISSLPLGYYTEVGDRGTQLSGGQKQRIAVARAMIKNPKLLLLDEPTSALDVESESIVQKAIDKISAGRTTIVIAHRIATVRNAHTIVVLECGSVTEIGDHHQLMRKAGTYYNLIKLASDDSDPTSKPRPEEDVTQKANDFSVYEKSFSDISRFTSKYSMSMHEEELEDMDHIKNKNPRKFKLYEIWKLQKPELVILLLGFLHGMFAGAFLSLFPLILGMALEAYFHEDTSEMRRNVGHLCLALVGLGFGCIISMTGQQGLCGWAGTKLTLRVSDFLFQAILKQEPGWFDFEENSTGVLVSRLSIDCVSFRSVLGDRFSVLLMGLSSAAVGFGVSFSLEWRLALLAAALAPFTLGASYLSLIINIGPRVDNNSYARASSIASGAVSNIRTITTLSAQEQIVTSFDQALLEPRKKSVKKSQFIGLTLGIFQGAMYGAYTLILWFGAYLVKQNKTEFGDVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLDIIDRRPLIGDDRTKDKKIEKSRSKSLEIEFNKVTFCYPSRPQVIVLKDFNLKVKARSKVALVGPSGSGKSTVIWMIQRFYDPNEGKVMIDGLDLREIDVKWLRRQMALVSQEPALFAGSIRENIAFGNVNATFTEIEEAARKAQVHNFISGLPQGYETQVGESGVQLSGGQKQMIAIARAILKRSRVLLLDEASSALDLESEKLIQISLRNVAKEATTIVVAHRLPTIREAQFIAVMEDGTVVESGSHETLMASHGDGLYASFVRAQTQANAFSAS 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1718 1385 Gene3D ABC transporter type 1, transmembrane domain 157 1100 IPR036640 GO:0005524|GO:0016020
Acco09g1718 1385 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 496 732 IPR003439 GO:0005524
Acco09g1718 1385 MobiDBLite consensus disorder prediction 85 106 - -
Acco09g1718 1385 FunFam ABC transporter B family member 1 1127 1377 - -
Acco09g1718 1385 SUPERFAMILY ABC transporter transmembrane region 793 1119 IPR036640 GO:0005524|GO:0016020
Acco09g1718 1385 Gene3D ABC transporter type 1, transmembrane domain 1101 1381 IPR036640 GO:0005524|GO:0016020
Acco09g1718 1385 SUPERFAMILY ABC transporter transmembrane region 158 480 IPR036640 GO:0005524|GO:0016020
Acco09g1718 1385 ProSitePatterns ABC transporters family signature. 1276 1290 IPR017871 GO:0005524|GO:0016887
Acco09g1718 1385 Pfam ABC transporter 514 663 IPR003439 GO:0005524
Acco09g1718 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1133 1376 IPR027417 -
Acco09g1718 1385 FunFam ABC transporter B family member 4 486 738 - -
Acco09g1718 1385 FunFam ATP-binding cassette transporter, subfamily B, member 2, group MDR/PGP protein PpABCB2 986 1126 - -
Acco09g1718 1385 Pfam ABC transporter 1155 1303 IPR003439 GO:0005524
Acco09g1718 1385 CDD ABC_6TM_Pgp_ABCB1_D1_like 177 469 - -
Acco09g1718 1385 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 172 461 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g1718 1385 MobiDBLite consensus disorder prediction 85 120 - -
Acco09g1718 1385 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 819 1099 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g1718 1385 ProSitePatterns ABC transporters family signature. 635 649 IPR017871 GO:0005524|GO:0016887
Acco09g1718 1385 Gene3D - 486 734 IPR027417 -
Acco09g1718 1385 Gene3D - 1124 1377 IPR027417 -
Acco09g1718 1385 Pfam ABC transporter transmembrane region 171 444 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g1718 1385 Pfam ABC transporter transmembrane region 812 1083 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g1718 1385 SMART AAA_5 523 707 IPR003593 GO:0016887
Acco09g1718 1385 SMART AAA_5 1164 1350 IPR003593 GO:0016887
Acco09g1718 1385 PANTHER ABC TRANSPORTER B FAMILY 136 732 IPR039421 -
Acco09g1718 1385 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1137 1373 IPR003439 GO:0005524
Acco09g1718 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 731 IPR027417 -
Acco09g1718 1385 CDD ABC_MTABC3_MDL1_MDL2 496 733 - -
Acco09g1718 1385 CDD ABC_MTABC3_MDL1_MDL2 1137 1376 - -
Acco09g1718 1385 CDD ABC_6TM_Pgp_ABCB1_D2_like 802 1117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1718 Acco-ChrAcco09 33835734 33843326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1718 879 1380 Calmodulin-binding Proteins AT2G36910 38.690 3.73e-100 348