Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1712 ATGTCGAAATTCCCCGACCCGCTGCCGGATGGCTGGAGCCTCGGCAAGGCGACGGAGAGGACTAATTTCACTCAGTATTGTAACGTCTTGAGCCAGCTCTTGAAGGAGAAGCGAGTTTCTGGATCTTTAAGCCTTGGAATGGCTGGGAAAATGGAATCTAGAGCAATTACGAAGGACTCGAAGACAAACCTGGAAAATCCTGATGATACATTGAGACTAAATTCTTCAGCTATGGAATGTCTTCCTCAGTTCGTGGAAAACGCCTGTATCAAGAAGTCTGATTCGAGGTCAGACCCTGAACCCCAAATGACGATATTTTATGCTGGAAAAGTGTTAGTGTTTGATGCTTTTGCGCCCGAGAAGGCCACGGAGATCATGGAGCTAGCCACCAAATTAAGCTCTGATAGTACTAATTCTGACATTAACAAGAACCTTCCAACTGCTTCTACTGTTAAGGAAAACCAGGATCTGGCCAAAGTGCCACAAAACAACACTGCTCAGGAACAGGCAGTCCCTAAACCTGGACTTGCCCCTATTAAATCAGATATGAGATACCCAAGAAGAGCTTCGCTTCTAAAGTTCCTTGAGAAGAGAAAAGAAAGGGTGATTGCTAAAGGACCTTACCAGCTGAGCAATCCAAATAGTCCAAAGCCGGATGGAAGCAGCTCAGGAGGGGACCCTGATCAAGGCCAGTCTGCCAAATCATTTGACCTTAACATGTAG 723 0.4606 MSKFPDPLPDGWSLGKATERTNFTQYCNVLSQLLKEKRVSGSLSLGMAGKMESRAITKDSKTNLENPDDTLRLNSSAMECLPQFVENACIKKSDSRSDPEPQMTIFYAGKVLVFDAFAPEKATEIMELATKLSSDSTNSDINKNLPTASTVKENQDLAKVPQNNTAQEQAVPKPGLAPIKSDMRYPRRASLLKFLEKRKERVIAKGPYQLSNPNSPKPDGSSSGGDPDQGQSAKSFDLNM 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1712 240 ProSiteProfiles Tify domain profile. 96 131 IPR010399 -
Acco09g1712 240 SMART tify_2 96 131 IPR010399 -
Acco09g1712 240 Pfam tify domain 101 129 IPR010399 -
Acco09g1712 240 MobiDBLite consensus disorder prediction 208 240 - -
Acco09g1712 240 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 216 IPR040390 -
Acco09g1712 240 MobiDBLite consensus disorder prediction 161 181 - -
Acco09g1712 240 Pfam Jas motif 187 209 IPR018467 -
Acco09g1712 240 MobiDBLite consensus disorder prediction 203 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1712 Acco-ChrAcco09 33783140 33785971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1712 22 213 Tify Gene Family AT1G19180 36.000 1.52e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Acco09g1712 tify 1.2e-14 No_clan