Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1696 ATGGCAGGACCAAGTAGTTTTATCCCAGTTTCTGATACATCCGAAACAGCATTACTGGATGCTTTGTTGTATGATGATCAGCATAACATGTCATTTACTTCTTTGTTATCTCCTAATCCCTTTGAAATGTTTATTCCTCCTTCTACTATTCCTCCTTCTGCTTCAAATGTACCTACTTCTCCCCCTAGAACAAGTGTTCTTCCTCAATCTACAAGGATTGAAGGTACAACTGAAGCAGGTTCATCAAGGAGGCCTGTTAAGAGGTGTAGAACTATGGCAGAACTAATGGAGTCTACCAATCCAGTTCAGCCAATAGTGTCGGCAGTTAATCAACCAGCATTCACTAGCCAGCAAACTATCATCAGTTTGCCAGCAACAACCAGCCCGACAACAACAATCAGCCAACCAACAACCACTAGCCAGCCAGCAACAATTAGCCAGCCAACAGCTACAAGCCAATTAGCAACTACTAGCTTATTGGAATGTAGTTGCTGTCATGTTTTACGGGAAATTATTCATACCAACGGACTTCAGTACCATAAACTTGAAGTTCACGGAAGAAGAACAGGTATGATTACCCATGCTGTTTTATTTGAAAAAGTACAGGATAAATCTTATAATACTGACAGGCTTCCAATGTTTGATTTCACAAAGAAAAATTTTGAAGAAATCAAACAATTTCTGACACAGTATTGTATAGATTTACAAGCATCAGGATATATCTTGATGCGTGATCCTGTATTAGCCTATCATGAGGTTCTCTGTGTTGGTTCGGAATGGGCTATAAATCCAAATGACCTCCATGGAAGTTCATTTCAAACCAATATTGAACACTCATTAGGCAAAGGAAAACAACCTGCAGTAAGTATACCCTATGATACTTCATCCCTTAACCAGGGTGAATTATATAGGTTATCTATGGAGCAAAGAGAAAGAATAAAGAAAACAACGCTCCATGATTTAAGAAATTATTTTCACTTAACCCTTGATGAAGCGAGTAAACAATTAAATATGTCTACTCACACCATACAAAAAATCTATCAAAAAGGAGGGTTAACGGAGTGGCCACACAAGAAGCTCAAGAAACTTATGACGCAAATCTCGATATTACGAAGAGCTTTGCCTCATCTGGATCCCATCTCAAGAGAAGCAAAAGAAGAAGACATTAAATATCTTCAGAATGAGATGATTAAAGTTTGTAATGATGTTGAGCCACTCGCAATTAAACTTTGTTGA 1236 0.3819 MAGPSSFIPVSDTSETALLDALLYDDQHNMSFTSLLSPNPFEMFIPPSTIPPSASNVPTSPPRTSVLPQSTRIEGTTEAGSSRRPVKRCRTMAELMESTNPVQPIVSAVNQPAFTSQQTIISLPATTSPTTTISQPTTTSQPATISQPTATSQLATTSLLECSCCHVLREIIHTNGLQYHKLEVHGRRTGMITHAVLFEKVQDKSYNTDRLPMFDFTKKNFEEIKQFLTQYCIDLQASGYILMRDPVLAYHEVLCVGSEWAINPNDLHGSSFQTNIEHSLGKGKQPAVSIPYDTSSLNQGELYRLSMEQRERIKKTTLHDLRNYFHLTLDEASKQLNMSTHTIQKIYQKGGLTEWPHKKLKKLMTQISILRRALPHLDPISREAKEEDIKYLQNEMIKVCNDVEPLAIKLC 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1696 411 MobiDBLite consensus disorder prediction 52 86 - -
Acco09g1696 411 ProSiteProfiles RWP-RK domain profile. 303 384 IPR003035 -
Acco09g1696 411 PANTHER PROTEIN RKD4 122 400 IPR044607 GO:0003700
Acco09g1696 411 MobiDBLite consensus disorder prediction 59 78 - -
Acco09g1696 411 MobiDBLite consensus disorder prediction 127 148 - -
Acco09g1696 411 Pfam RWP-RK domain 317 363 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1696 Acco-ChrAcco09 33486846 33488081 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1696 280 381 NLP Transcription Factor Family AT1G76350 25.243 9.12e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Acco09g1696 RWP-RK 1.3e-11 No_clan