Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1680 ATGTTTATTGGAAACTCTGGATATACAATAGACATACTTTGGGAAGTAAATTTACCTGCTGAACAAGTTCCTCCAGAACTTCCAGGGCCTGTGCTGGGCATAAACTTTGCTAGGGATGGCTTGCAAGAAAAAGACTGGTTATCTTTAGTTTCTGTACGTGGTGATTCATGGTTACTTGCTACCGCTTTCTACTTTGGAGCCAGATTTGGGTTTGATAGAGCTGACAGGAAACGGCTTTTCAACATGATTAATGAACAACCAGTTATATTTGAAGCTGTTACGGCCTTACGGGTACAGCAAAGAAACAACTTCAGGAGAAGCCTTCAGGTTCAAATCACGGTGGCAGTAAATCAAAGTCCAACTGTAAAGCGGCGCTTGTATGAAGTTCAGAAAGCAGACAAAAAGCGAGGTTCAGAATCTGTGGGAAAGCATTCAAAGGCTATGCAGTCAAGAGACGAGGAAGAAGAACTGGATGAAGTAGATGAACATGGAGAGACTTTGTGCAGGGCATGTGGGGAGAATTATGGTACTGGTGAATTCTGGATTCGACATCTGCGAAAATGGTTCCATGGAAAATGTGTGAAGATCACCCCAGCTAGGGCAGTACATATCAAACTATACAAATGCCCATCATGCAGTAACAAGAGGACTCGTCCTCGTCCCTGA 666 0.4339 MFIGNSGYTIDILWEVNLPAEQVPPELPGPVLGINFARDGLQEKDWLSLVSVRGDSWLLATAFYFGARFGFDRADRKRLFNMINEQPVIFEAVTALRVQQRNNFRRSLQVQITVAVNQSPTVKRRLYEVQKADKKRGSESVGKHSKAMQSRDEEEELDEVDEHGETLCRACGENYGTGEFWIRHLRKWFHGKCVKITPARAVHIKLYKCPSCSNKRTRPRP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1680 221 ProSitePatterns Zinc finger C2H2 type domain signature. 168 190 IPR013087 -
Acco09g1680 221 SUPERFAMILY FYVE/PHD zinc finger 159 218 IPR011011 -
Acco09g1680 221 PANTHER CPG BINDING PROTEIN 14 218 IPR045104 GO:0006355|GO:0042393
Acco09g1680 221 MobiDBLite consensus disorder prediction 130 160 - -
Acco09g1680 221 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 158 214 IPR013083 -
Acco09g1680 221 CDD PHD_AL_plant 167 215 IPR044104 -
Acco09g1680 221 MobiDBLite consensus disorder prediction 130 153 - -
Acco09g1680 221 FunFam PHD finger alfin-like protein 160 214 - -
Acco09g1680 221 Pfam Alfin 12 94 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1680 Acco-ChrAcco09 33176592 33179253 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1680 14 218 Alfin-like Transcription Factor Family AT3G42790 54.589 6.33e-60 187