Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1654 ATGGGTTTTGATGCGGACACTGGACTCCATGAAGGATGTTCATCAATTGAAAGGTCCTCCTCTGAGAAACTTCAATTGGAGTGCTTAGAAGATACTGCAGAGGCAGATCAAGGGAAATTAAATGCACGACTTCAGTATATTGAGCAGATGTTGCAAAAGGTCAAGGAAGAAGAGAAGCTTCGTTTGTCCTGTGGATCACATGGTCTTCCTTATGTAAATGTAGACAGCCAGTGTTCTGCTGCTGATTTGCCTGTCATGGATGGGATAACTCAGTGTGATGCTTTCTTCCAGGAAATTATTCCTTCTTCAGCACCATCTTTAAACAACAGTCATAGTAATCAATCACAAAATATTGGTGGGTTTTCTAGACCTTCCGAAGGACAAATGGAAAGTGGATCATCTTCCTCTGCTGTCTATTCTACTCTGAAGCCTGATTTTTCGATGATAAAAGGAGAAATATGCCTGGACAAGTTATCAATCAGAGAACTTCATGAACTGTTCAAAGTGACTTTTGGTCGGGAAACTACTGTGAAAGACAAGCAGTGGTTGAAGAAGAGGATTGCCATGAGTTTAACTAACTCATGTAATGTTTCAGCAACAACTTTCATAGTTAAAGACAACATATTAGTTAAAAAATGTGAGGAAGGTAGTGATGGAAATGTGGATGCTGTACTCTTCAAGGATACTGCAGCTGGAGAAGACGATATCAACTGTAAGGATTCATCATGTGCTGAGGATACTGGAAATGAAGACAATCAAGTTGTTTCTGGAAAGACACTGAGAAGTCATGAATTGGAGCATGATTTATGTTGTGAGAATCTCCTGATAGAACAAAGAGCTGCCAAAAGAATCCGGAAGCCCACTAGGAGATATATTGAAGAGCTCTCTGAAAGTGAGTCCAGGGACCACAATCCTAGATTGTTAAGTTCAAACCAAAGTATGGAACTTGAACATGTCTCTCCAAATTCATACAATGGGCCTGCTAGGAATGATTTTTCAGAGGGGAGAACTCCTGTTACTAGGTTTGACTCTCTGGGAGGTTCTGGCATTTATATACCTTGTGTTTCCCGGATTCGAAGATGTCGTCCAAGGAAAAATATCATGCCCCTTATGAAATTCCGTCAAAGCGGTGGCATGGTGGAGGTTGCCAACTCAAGCAATGAGGTCCTTGGAGAGCATGATACTCAAGAAGATAAGGGATGCGACGGGGTTTTAAAATCAAGATCCCTGCCTGCAAAATTCCAGCAGCGATTTACTGCTGAGCAGAAAGATGAACAGTCTCCCACACTGGACAGAATTGAACTACGGCAGGATTCAAGACTGAGAAAGGCAGATCTATCTAGCAATAGTTCAGATGACAACATGGTGACTGTCCCAACTTCAAAAGGTGGAATGAGAAGGAAACATCATAGAGCATGGACCCTTGCTGAGGTAATGAAATTGGTTGAAGGTGTATCACGGTGTGGAGCAGGGAGGTGGTCTGAGATCAAACGGCTTTCCTTTGCTTCTTACTCATATCGTACGTCTGTTGATCTTAAGGATAAGTGGAGGAATTTGCTTAAAGCTAGCTCTGTGCAGACAGCTTCGGATGAGGGTATGAACTCACGAAAGCATGGTACAGTCCCCATTCCTGAGCCGATTTTGGTACGAGTAAGAGAGCTTGCGGGGAAGAATTCTCGGGTGCCTACAAGCTTCAGCTCAAGCAAACTGACAGCCTGTACTGGGGTTGCTCATGATGACGATAGATCAGAGTACTTGTAG 1761 0.4287 MGFDADTGLHEGCSSIERSSSEKLQLECLEDTAEADQGKLNARLQYIEQMLQKVKEEEKLRLSCGSHGLPYVNVDSQCSAADLPVMDGITQCDAFFQEIIPSSAPSLNNSHSNQSQNIGGFSRPSEGQMESGSSSSAVYSTLKPDFSMIKGEICLDKLSIRELHELFKVTFGRETTVKDKQWLKKRIAMSLTNSCNVSATTFIVKDNILVKKCEEGSDGNVDAVLFKDTAAGEDDINCKDSSCAEDTGNEDNQVVSGKTLRSHELEHDLCCENLLIEQRAAKRIRKPTRRYIEELSESESRDHNPRLLSSNQSMELEHVSPNSYNGPARNDFSEGRTPVTRFDSLGGSGIYIPCVSRIRRCRPRKNIMPLMKFRQSGGMVEVANSSNEVLGEHDTQEDKGCDGVLKSRSLPAKFQQRFTAEQKDEQSPTLDRIELRQDSRLRKADLSSNSSDDNMVTVPTSKGGMRRKHHRAWTLAEVMKLVEGVSRCGAGRWSEIKRLSFASYSYRTSVDLKDKWRNLLKASSVQTASDEGMNSRKHGTVPIPEPILVRVRELAGKNSRVPTSFSSSKLTACTGVAHDDDRSEYL 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1654 586 MobiDBLite consensus disorder prediction 311 330 - -
Acco09g1654 586 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 465 524 IPR017930 -
Acco09g1654 586 Gene3D - 460 566 - -
Acco09g1654 586 ProSiteProfiles Myb-like domain profile. 473 520 IPR001005 -
Acco09g1654 586 MobiDBLite consensus disorder prediction 418 447 - -
Acco09g1654 586 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 6 567 - -
Acco09g1654 586 SMART sant 469 522 IPR001005 -
Acco09g1654 586 MobiDBLite consensus disorder prediction 417 467 - -
Acco09g1654 586 CDD SANT_TRF 471 521 - -
Acco09g1654 586 Pfam Myb-like DNA-binding domain 472 520 IPR001005 -
Acco09g1654 586 MobiDBLite consensus disorder prediction 106 136 - -
Acco09g1654 586 MobiDBLite consensus disorder prediction 311 340 - -
Acco09g1654 586 SUPERFAMILY Homeodomain-like 467 525 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1654 Acco-ChrAcco09 32943221 32948702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1654 473 531 Single Myb Histone (SMH) Gene Family AT1G17520 40.984 1.11e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1654 Myb_DNA-binding 4.3e-07 CL0123