Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1653 ATGTTGAAGAGGGTATTTAAGTTTGCTTCAGCACGCAATTCCTATTTTGGTGCTTCTGCTACATATGGCATTGCCCTATTATGCCTCAATCCTGATCGTAGCAGCACTAATAGCTGCATTTCTATTCTTCAGCCTCACCATGCTTGAGCTGCAGAAGCTGTACAAGGCACTGATCAGACTGAATGCGTCATATGTTTGGCACCTTTTGAAGAAGAAGACAGTATGAGGCAGCTTCATAGCTGCAGACACATCTTTCATACGATCTGCATCGACACTTGGTTCGCCTCTCATTCTGGCTGTCCTTTGTGCAGAACCCAGATAGACCATGTGCCATCTTCTCCAGATGTGGTTGAGGAAGTGTCCATTTCCAGAAGGTCTGTGGCTTCAGAGGAAAATGACCCGAGTTGGGCGGTCTTGTTCCTTGTCAGCTGCTGA 435 0.4667 MLKRVFKFASARNSYFGASATYGIALLCLNPDRSSTNSCISILQPHHAXAAEAVQGTDQTECVICLAPFEEEDSMRQLHSCRHIFHTICIDTWFASHSGCPLCRTQIDHVPSSPDVVEEVSISRRSVASEENDPSWAVLFLVSC 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1653 144 ProSiteProfiles Zinc finger RING-type profile. 62 104 IPR001841 -
Acco09g1653 144 Pfam Ring finger domain 61 104 IPR001841 -
Acco09g1653 144 SMART ring_2 62 103 IPR001841 -
Acco09g1653 144 SUPERFAMILY RING/U-box 46 111 - -
Acco09g1653 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 110 IPR013083 -
Acco09g1653 144 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 40 111 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1653 Acco-ChrAcco09 32934370 32934930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1653 6 107 C3H Transcription Factor Family AT4G33565 38.532 1.90e-16 72.8