Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1652 ATGTTGAAGAGAGTATTTAAGTTTCCTTCAACAATACCTATTTTGGTGCTTCTGCTACATATGGCATTGCCTTATTATGCTTCAATCCTGATCGTAGCAGCACTTATAGCTGCACTTTTATTCTTCAGCCTCACCATGCTTGGGTGGTGTACCTACAGAAGCATTTATCAGATACAATCCATTCCATCCACAAGAACAAACTTTGATGACGAGTTTCTATCCTGTACCCCAAGCCTAGAGTCTCATTCCAAGACGTTTCAGTACAGAGCTGCAGAAGCTGTACAAGGCACTGATCAGACTGAATGCGTCATATGTTTGGCACCTTTTGAAGAAGAAGACAGTATGAGGCAGCTTCATAGCTGCAGACACATCTTTCATACGATCTGCATCGACACTTGGTTCGCCTCTCATTCTGGCTGTCCTTTGTGCAGAACCCAGATAGACCATGTGCCATCTTCTCCAGATGTGATTGAGGAAGTGTCCATTTCCAGAAGGTCTGTGGCTTCAGAGGAAAATGACCCGAGTTGGGCGGTCTTGTACCTTGTCGGCTCCTGA 555 0.4486 MLKRVFKFPSTIPILVLLLHMALPYYASILIVAALIAALLFFSLTMLGWCTYRSIYQIQSIPSTRTNFDDEFLSCTPSLESHSKTFQYRAAEAVQGTDQTECVICLAPFEEEDSMRQLHSCRHIFHTICIDTWFASHSGCPLCRTQIDHVPSSPDVIEEVSISRRSVASEENDPSWAVLYLVGS 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1652 184 Pfam Ring finger domain 101 144 IPR001841 -
Acco09g1652 184 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 26 151 IPR044675 -
Acco09g1652 184 SUPERFAMILY RING/U-box 89 151 - -
Acco09g1652 184 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 152 IPR013083 -
Acco09g1652 184 ProSiteProfiles Zinc finger RING-type profile. 102 144 IPR001841 -
Acco09g1652 184 SMART ring_2 102 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1652 Acco-ChrAcco09 32929835 32930389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1652 76 147 C3H Transcription Factor Family AT4G33565 47.945 1.34e-16 74.7