Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1648 ATGAATTTGCAACAAGTTGGGCAGTCTAGATCCTCTAATGGATATGGCCGTCGAAAATCTGAAAGAGAAGGGGCAGCCAAGTCAGAGAATAAGATCTCGTCTGGGAAGTCAAATGCCAACAGACTGGCAAGTCCAGGTATAGTGACTGGCAATATAGGTGATAGTCCTTCACATGATCGACTAGTATATGTTACAACATGTCTTATTGGGCAGCAAGTGGAAGTGCATGTGAAAAATGGATCTATATACTCTGGAATATTTCATGCAACAAATACTGGGAAAGATTTTGGAATCATTTTAAAGATGGCTCGCTTGACAAAGGATGGTTCATTGCGAGGGCAGAAGTCTGGTATAGAATCAGTCAGCAAGGCTCCTTCAAAGACTTTAATCATACCTGGCAAAGAATTTGTACAAGTCATAGCAAAGGGCGTTGCTGTTACCAGAGATGGCCTACCTAATGAGGCTCACTATGAAGTGTATCAGGACATCATTGTTGATTCAGTAATATCACAATCACGCCATGTCGACTTGGAGAGAGAACTGCAACCATGGGTGCCTGCTGAAGATGATCCACAATGCCCTGAGCTAGAAAATATCTTCGATGAAACTTGGAATAGGGGCTGGGATCAGTTTGAAACAAACAAAGCATTGTTTGGCGTAAAAAGTACGTTCAATGAGGAACTTTATACCACAAAGCTTGAGAAAGGCCCTCAGACAAGAGAGTTCGAAAAGCAAGCTTTAAGAATAGCTAAAGAGATTGAAGGTGAAGATACCCAAGATCCTCACCTGGCTGAGGAAAGAGGCCTTTATCTAAATACGAATTTTGATATCGACGAAGAGACTAGATTCTCTTCAGTCCATAGGGATAAAGGGGTTGATGACAGTGGCTATGATGAGAATGAGGATACTCTGTTGGACTCACACAATTCTGAAACCTTTGGAGATACATTTGCATCCGTTGTTATGAGGTCTGGTGAATCAAGTGATGGAAAATATGATGATGGAGTTAGACAATCAAATTCATCCTCTAAGGATTTACCTCTATCATCTCAGTCAAGTAATGGTGTGGATTTAGGCTGTGCTGGTTCTCATAATCTTGCTAATGAATTAGTATCTGGACTTGCTGCAAAAAGTGAACCTACTCCAGATGCTGAATGCAGGGTTCAGGGGAACTCACTTACTGATCTGCATGAAGCCATTGACAGGAGCAAGGAAGAAAATCTGATAGAATCTGAGGATGTTCAACCATCAAAATCCAAGGATTTACAGTCATCACACAACTTGAAGAAAGACGAACCTAATACTGGGGCATTGTCTACAAGCGCTGTCTCTCATTCCCCTTTATCTCATATTTCATCCAAGACTCCTGAGAAGACAGTTTTGCCTGTTGATTTGATTGGGGGTTCAACATCTGAGAAGGATAAAGGGCTAACAAATTCTTTAAAATCCTCTGGAATAACTGCCGGTTCTACATCAACTCGTACAGATTGTGTGAAAGGTGTTGAAGCATCTTTTGGTCCTGGCCTATCACCAAGTTCTTCAGTCGGTTCATCATCCTCTGAAAAATCAACACTGAATCCGAACGCAAAGGAATTCAAGCTCAATCCAAATGCTAAGAGTTTCGTTCCATCCCAATCACCAGTTAGGCCTCCCTCACAGGTTTTGGATGGTTCCTTCTATCGTTACCCAACTAATGTAACTGCTGTACCCCATGTGCCTGCCATGCCCATGGAACTTGGAATGGGACACACATTTGCTGGGCTGCAACCTGTCCCGTATAATCCACAAGTAGCTCAAATGTCATCCCAAGCATATTTTCATCCAAATGGACCACAGTACGGACAGCCGGTTCATCATAGGCAATTTTCATACATGCCAGGTTATTTACCTGAAACACCGTCCCTTGGACGGGATTACTAA 1920 0.424 MNLQQVGQSRSSNGYGRRKSEREGAAKSENKISSGKSNANRLASPGIVTGNIGDSPSHDRLVYVTTCLIGQQVEVHVKNGSIYSGIFHATNTGKDFGIILKMARLTKDGSLRGQKSGIESVSKAPSKTLIIPGKEFVQVIAKGVAVTRDGLPNEAHYEVYQDIIVDSVISQSRHVDLERELQPWVPAEDDPQCPELENIFDETWNRGWDQFETNKALFGVKSTFNEELYTTKLEKGPQTREFEKQALRIAKEIEGEDTQDPHLAEERGLYLNTNFDIDEETRFSSVHRDKGVDDSGYDENEDTLLDSHNSETFGDTFASVVMRSGESSDGKYDDGVRQSNSSSKDLPLSSQSSNGVDLGCAGSHNLANELVSGLAAKSEPTPDAECRVQGNSLTDLHEAIDRSKEENLIESEDVQPSKSKDLQSSHNLKKDEPNTGALSTSAVSHSPLSHISSKTPEKTVLPVDLIGGSTSEKDKGLTNSLKSSGITAGSTSTRTDCVKGVEASFGPGLSPSSSVGSSSSEKSTLNPNAKEFKLNPNAKSFVPSQSPVRPPSQVLDGSFYRYPTNVTAVPHVPAMPMELGMGHTFAGLQPVPYNPQVAQMSSQAYFHPNGPQYGQPVHHRQFSYMPGYLPETPSLGRDY 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1648 639 MobiDBLite consensus disorder prediction 334 357 - -
Acco09g1648 639 MobiDBLite consensus disorder prediction 472 498 - -
Acco09g1648 639 SMART LsmAD_2 218 289 IPR009604 -
Acco09g1648 639 MobiDBLite consensus disorder prediction 429 456 - -
Acco09g1648 639 MobiDBLite consensus disorder prediction 286 308 - -
Acco09g1648 639 MobiDBLite consensus disorder prediction 400 532 - -
Acco09g1648 639 PANTHER ATAXIN 2-RELATED 33 628 IPR045117 GO:0003723
Acco09g1648 639 MobiDBLite consensus disorder prediction 15 29 - -
Acco09g1648 639 MobiDBLite consensus disorder prediction 324 357 - -
Acco09g1648 639 Pfam Ataxin-2 C-terminal region 521 532 IPR009818 -
Acco09g1648 639 MobiDBLite consensus disorder prediction 286 311 - -
Acco09g1648 639 Pfam LsmAD domain 218 288 IPR009604 -
Acco09g1648 639 MobiDBLite consensus disorder prediction 400 428 - -
Acco09g1648 639 FunFam Polyadenylate-binding protein-interacting protein 3 62 135 - -
Acco09g1648 639 Gene3D - 65 138 - -
Acco09g1648 639 MobiDBLite consensus disorder prediction 30 45 - -
Acco09g1648 639 Pfam Ataxin 2 SM domain 58 142 IPR025852 -
Acco09g1648 639 MobiDBLite consensus disorder prediction 1 50 - -
Acco09g1648 639 MobiDBLite consensus disorder prediction 507 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1648 Acco-ChrAcco09 32860932 32867494 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1648 09 32860932 32867494 Acco07g0362 07 4135154 4137604 CCT
Acco09g1648 09 32860932 32867494 Acco09g1648 09 32860932 32867494 ECH