Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1643 ATGGATGGGGGACGACGATCTCACGCTGATTATGCTATTGTCAACTTGGAAGAGAAGGAGAATTTGTGCTTGTATGGTTATCCTAGTGAGCAGTGGGAAGTAAATTTACCTGCTGAACAAGTTCTTCCAGAACTTCCAGAGCCTGTGCTGGGCATAAACTTTGCTAGGGATGGCATGCAAGAAAAAGACTGGTTATCTTTAGTTGCTGCCCATAGTGATTCATGGTTACTTGCTATCTCTTCCCACTTTGGGGCCAGATTTGGGTTTATAGAGATGACAGATATGATTGATGAACACTTCAAGTGTATACTTCAATGTTTGCTTCTACAGCTTTTGGATCCTGATTGTAACTCTACTCAGCGACTGAAAGCGGTGGTGTGTTTCACTTCATTAACGGAGGAAGAGAAAGAAAAGGCAGCCAGCATTGGAGTGAAGCAATATTCATGGGATGAAAGATTTTTATTTTCAAGTAACAAGCACGAATGTGTTGGAAGAATATTTTTATTTTCAATATATCCACATAACATGAGCTGCAATGAGTTGTTACATTGA 552 0.4022 MDGGRRSHADYAIVNLEEKENLCLYGYPSEQWEVNLPAEQVLPELPEPVLGINFARDGMQEKDWLSLVAAHSDSWLLAISSHFGARFGFIEMTDMIDEHFKCILQCLLLQLLDPDCNSTQRLKAVVCFTSLTEEEKEKAASIGVKQYSWDERFLFSSNKHECVGRIFLFSIYPHNMSCNELLH 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1643 183 PANTHER CPG BINDING PROTEIN 17 91 IPR045104 GO:0006355|GO:0042393
Acco09g1643 183 Pfam Alfin 18 88 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1643 Acco-ChrAcco09 32818572 32822683 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1643 18 89 Alfin-like Transcription Factor Family AT5G20510 77.778 2.20e-29 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1643 09 32818572 32822683 Acco07g0363 07 4144112 4147667 CCT
Acco07g0363 07 4144112 4147667 Acco09g1643 09 32818572 32822683 ECH
Acco09g1643 09 32818572 32822683 Acco09g1643 09 32818572 32822683 ECH