Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1636 ATGAAACAGAGCATCATGCTACTGCCGGAAACTTCTTCACCAACAGTCCATCCTCTCTCTCCACCGTCTTCATCAATCTTCTTCCACCGTAGGATTAAAGCTCGTTGGAGCAGATGCAACGATCAAGGAAAAGGAATTTCTGATATCGAATCTACTGAAATCTGGGGCAAAATGTTATTGTTTTCAGAAATCGGAACAAGTGGAAACAATCGGCAGCAAAGGCAAGTCAACCATGATGATGCTGAATTTGAGAATTTAGAGAATGATATGGACGATGTTCCAGAGGGACAATTATGTGTTATATGCCTGATGAGGAGAAGGCGTTCTGTGTCTATTCCCTGCGGGCATCTTGTGTGTTGTCAAGGGTGTGCTGTATCAGTTGAACGTAATGTGGCACCCAAGTGTCCTGTTTGTCGGCAGGAAATTCGCAATTCAGTGCGGATATTTGAATCTCTGGGTCAAGGTTTGAATGTTCAAATTCAAAACAGGTCATCACAAAACAGGAATGGTAGACCGGGTTTTTGTTTTTGTGGTGGTAGTGGTTTGAAGTATATTGGAGAACATGAAATTCTTATGCCACCATTTGCCTCTGAAATTTGTATACGTAACCTAACTATTTCCAGTTCAGTTCAGCATGGTGGTATATCTGAATGTACAGAAGGGTTATCTGTTGAAGCCAACCTTCAATCTCCTAAAGCCTACTCATCAAAGATGAAGCTGATTCGCCGTTATCATTCTTGTTTAGCTTCCACAAGGTACAGAAAGAAACTGGTTGTCCCTTCCACCACAGTCCCTCACTGGTATGGTTATCATCATACTTCCTCAATAAAGCTCGATCTCCATCAATGGCTTCCTCGCCGAATTTCTCCCCTAGAAACCCGGCTTCTCTCATTCTATCAATCCACCTCAGCTGTGAATTGGTAA 924 0.4264 MKQSIMLLPETSSPTVHPLSPPSSSIFFHRRIKARWSRCNDQGKGISDIESTEIWGKMLLFSEIGTSGNNRQQRQVNHDDAEFENLENDMDDVPEGQLCVICLMRRRRSVSIPCGHLVCCQGCAVSVERNVAPKCPVCRQEIRNSVRIFESLGQGLNVQIQNRSSQNRNGRPGFCFCGGSGLKYIGEHEILMPPFASEICIRNLTISSSVQHGGISECTEGLSVEANLQSPKAYSSKMKLIRRYHSCLASTRYRKKLVVPSTTVPHWYGYHHTSSIKLDLHQWLPRRISPLETRLLSFYQSTSAVNW 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1636 307 Coils Coil 69 89 - -
Acco09g1636 307 MobiDBLite consensus disorder prediction 1 20 - -
Acco09g1636 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 159 IPR013083 -
Acco09g1636 307 Pfam Zinc finger, C3HC4 type (RING finger) 97 144 - -
Acco09g1636 307 ProSiteProfiles Zinc finger RING-type profile. 99 139 IPR001841 -
Acco09g1636 307 SMART ring_2 99 138 IPR001841 -
Acco09g1636 307 SUPERFAMILY RING/U-box 92 145 - -
Acco09g1636 307 CDD RING-HC_SPL2-like 94 140 - -
Acco09g1636 307 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SPL2 71 151 IPR044247 GO:0004842
Acco09g1636 307 FunFam Baculoviral IAP repeat containing 7 108 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1636 Acco-ChrAcco09 32713545 32716990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1636 90 148 C3H Transcription Factor Family AT3G06140 37.288 1.09e-06 47.8