Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1632 ATGGGAAATCAGAAGCAGAAATGGACGGCGGAGGAGGAAGAAGCATTACTCGCTGGAATAGCGAAACACGGTCCCGGCAAGTGGAAGAACATTCTCAAGGATCCCGAGTTCGCGCCTTTCCTCACTCACCGTTCCAACATTGACCTCAAGGATAAATGGAGGAACTTAAGTGTTAATCCTGCTGCTCAAGGTTCTAAAGATAAAGCAAGGAATCCAAAGATTAAAGCTGTTATGCCTGCTCCTGTTGCTAGCATTCAAAACGCTACCTCTGCCACTCCAGTCCACCAAAGTGCAGCTACTGATACAGCCACTGAAGACGCTTCTCAAAAAGCGCAGGATGTGAAGAATGCTCCACGGTATAACGGAATGGTCTTTGAAGCCCTGTCAACAATAAAAGACGCTAATGGCTCTGACATAAATACCATTGTTAGTTTCATTGAGAAAAGGCATGAGGTACCTCCAAATTTCAGAAGGGCATTAAGTACAAGGTTGAGGAGGCTTGTTGCTCAAGGGAAACTTGAGAAGGTACAAAATTGTTACAAGATAAAAAAGGACACCCCTTCTGGGGCAAAAACACTTCCTATGAAACAAAAGGACATCTGGCAACATCAACCACAAGCCTCTAGTATAGTGCCTTCTCATGAGACCGCCAAGGATGCTGCTGATATGGCAGCCTACAGACTTGCAGAAGCTGAAAACAAATCTTTTCTGGCTGCTGAGGCAGTCAAGGAGGCAGAAAGGCTTGCAAAATTTGCTGAAGAAGCTGATGCAGTGTTACAACTAGCGAAAGAGATTTATGAACAATGCTTGCGTGGTGAAACTATTGTGTTGTCTTGA 837 0.448 MGNQKQKWTAEEEEALLAGIAKHGPGKWKNILKDPEFAPFLTHRSNIDLKDKWRNLSVNPAAQGSKDKARNPKIKAVMPAPVASIQNATSATPVHQSAATDTATEDASQKAQDVKNAPRYNGMVFEALSTIKDANGSDINTIVSFIEKRHEVPPNFRRALSTRLRRLVAQGKLEKVQNCYKIKKDTPSGAKTLPMKQKDIWQHQPQASSIVPSHETAKDAADMAAYRLAEAENKSFLAAEAVKEAERLAKFAEEADAVLQLAKEIYEQCLRGETIVLS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1632 278 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Acco09g1632 278 Gene3D - 2 58 - -
Acco09g1632 278 SUPERFAMILY "Winged helix" DNA-binding domain 116 192 IPR036390 -
Acco09g1632 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 62 IPR017930 -
Acco09g1632 278 PANTHER SINGLE MYB HISTONE 4 1 277 IPR044597 GO:0003691
Acco09g1632 278 MobiDBLite consensus disorder prediction 88 113 - -
Acco09g1632 278 FunFam Telomere repeat-binding factor 1 2 58 - -
Acco09g1632 278 Gene3D - 112 201 IPR036388 -
Acco09g1632 278 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 116 184 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco09g1632 278 SMART h15plus2 114 179 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco09g1632 278 Pfam linker histone H1 and H5 family 118 178 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco09g1632 278 SUPERFAMILY Homeodomain-like 2 60 IPR009057 -
Acco09g1632 278 SMART sant 4 59 IPR001005 -
Acco09g1632 278 CDD SANT_TRF 6 56 - -
Acco09g1632 278 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1632 Acco-ChrAcco09 32665806 32670020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1632 1 278 Single Myb Histone (SMH) Gene Family AT1G72740 51.943 3.32e-89 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco09g1632 Linker_histone 8e-10 CL0123