Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1620 ATGGGTGGTTCTCGAAAGTGGTTGAAATCACTCATTTCTTCAAAAAAGCCCTCCCCAAATGATCGAGAAAAGACTGATGGTGATAAGATCAAGAAGAAATGGAGGCTATGGAGGAACTCTTCTGAGATTATGGGACCATCCACGAAAGGTTCGACAAAGAAGAGAAGCGGCGTTGTATCAGACAAGCCGGAGTCTCTGTCGAATGATGCATTTACTGCTGCCATGGCTGCTGTGGTCCGGGCTCCACCAAAAGGTTTCTTGTTGATCAAGCAGGAATGGGCTGCCATTCGTATTCAAGCCCTGTTTCGAGGATTCTTGGCAAGAAGAGCTTTGAGGGCCTTAAGAGCAGTAGTGAGAATTCAAGCAATATTTCGTGGGAGGCAAGTGAGGAAGCAAGCAGCAGTAACTCTGAGGTGCATGCAGGCTCTGGTCAGAGTTCAGGCTCGTGTCAAAGCAAGGAGTGTGAGCTTATCACCGGACAGGAAACACACTCAATCTCATTCTCTTAAGCAGGCAGAGAGTGGATGGTGTGACATCCCGGGAAGCGTGGACGAAGTCAAAGGAAAGCTACAAATGAGACAAGAAGCAGCCATCAAAAGGGAGAGAGCAATGGCATACTCTCTCTCCACACAGCAATCAAGAGCAAGTGCTAGTCCAAACTCAAGAATCTCAAGGCCAATGTCTCCATTCAAGCATGACAATCTAGACAGTAGGAGCTTGTTAGAGAGGTGGATGGCGGCCAAGCCGTGGGAAAACAGGTTGAAATCAGAGGGATACTTTGAATCGCCGGACCGGACTCCATTATCAAGAAAAAGTGACAACTTTGTTCTCCCTAGAGCTAGAAAGAATGCTGTGACAACCAGGGTTTCACTAAAACCTCCCATGACTAGCCTATCAGCTCCATCATCATTATCATCATCTTCTGCTATAAGTTCTGAGTGTATATATGATGATAGCCCTCTTTCAGTTTCATGTACATCCCCCGAGGTAAAGAGTGTTCCTAAACCGAGCTTCATGAATTTCACTGAATCAACCAAGGCTAAACAGAGAGCCTGCAAGTGTTCCTCTCTAAATGGAGATGCTAGAAGCACTACTTCTGGTTCTGATCCTTCTGCTAATTTTTGGAGAGACTGCTATGCAACTCCTCAAAGGGCTAGTAATCAGAGAAGATACTCCTCCAGGAGATGA 1188 0.4621 MGGSRKWLKSLISSKKPSPNDREKTDGDKIKKKWRLWRNSSEIMGPSTKGSTKKRSGVVSDKPESLSNDAFTAAMAAVVRAPPKGFLLIKQEWAAIRIQALFRGFLARRALRALRAVVRIQAIFRGRQVRKQAAVTLRCMQALVRVQARVKARSVSLSPDRKHTQSHSLKQAESGWCDIPGSVDEVKGKLQMRQEAAIKRERAMAYSLSTQQSRASASPNSRISRPMSPFKHDNLDSRSLLERWMAAKPWENRLKSEGYFESPDRTPLSRKSDNFVLPRARKNAVTTRVSLKPPMTSLSAPSSLSSSSAISSECIYDDSPLSVSCTSPEVKSVPKPSFMNFTESTKAKQRACKCSSLNGDARSTTSGSDPSANFWRDCYATPQRASNQRRYSSRR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1620 395 MobiDBLite consensus disorder prediction 209 227 - -
Acco09g1620 395 MobiDBLite consensus disorder prediction 1 64 - -
Acco09g1620 395 SMART iq_5 90 112 IPR000048 GO:0005515
Acco09g1620 395 SMART iq_5 113 134 IPR000048 GO:0005515
Acco09g1620 395 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Acco09g1620 395 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Acco09g1620 395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 133 IPR027417 -
Acco09g1620 395 MobiDBLite consensus disorder prediction 16 38 - -
Acco09g1620 395 PANTHER IQ-DOMAIN 5-RELATED 1 368 - -
Acco09g1620 395 MobiDBLite consensus disorder prediction 346 375 - -
Acco09g1620 395 MobiDBLite consensus disorder prediction 209 231 - -
Acco09g1620 395 Gene3D - 89 143 - -
Acco09g1620 395 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Acco09g1620 395 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Acco09g1620 395 MobiDBLite consensus disorder prediction 346 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1620 Acco-ChrAcco09 32581304 32583787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1620 1 383 IQD Protein Family AT1G72670 48.456 9.73e-97 293