Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1619 ATGGGGCATCATTCTTGCTGCAACAAGCAGAAGGTGAAAAGAGGGTTATGGTCACCTGAAGAAGATGAAAAGCTCATCAACTACATCTCCACTTATGGCCATGGTTGCTGGAGCTCTGTCCCTAAACTTGCTGGTCTGCAGAGGTGTGGAAAAAGTTGCAGACTTAGATGGATCAATTACCTAAGACCTGATTTGAAACGAGGAAGCTTTTCTTCACAAGAAGCAGCACTCATCATAGAGCTCCATAGCATTCTTGGTAACAGGTGGGCTCAGATTGCCAAGCACCTACCTGGAAGAACTGACAATGAGGTCAAAAACTTCTGGAACTCAAGCATCAAGAAGAAGCTCCTTTCTCATGATCATCTCCTTGTTCCTCCTGCTTTTTCCACTTTTTCTGATCATCTTCTTCTTCATCATCATGCTCCTGTTGAAACCTTCTTCCCTTCTTCAAACCCTAATAATAATGTCTTCCTTAATAACTACTCTCATCTTCATCAACCTGATCATCATCAGCTATACATTCCATCACCAATCCCACAAGCTCTTCCTAATCTCCACCATCATAAAACTGATGACGTTGTTAAAGTAGACGACATTGCCAATTATGACCCCACCAATAACAACAATTTCCTTCATGTCCACCAGAATCCTATCTCTGAAACCACACCACCCAATAATGTTATTATTCCATCTTCATGTGAAGATGGAAATAATAATAACAATAATGAGACCAATGATAAGTGGTCGTCAATATTGGGTGTGAGTAATCTGAATCAAGAGAATAGTCAAATTACCAAAAGTGATGATCTTCTCTTTCATCATCTTGTTGCAGAGAAGTTCATAAACCCATTACCAGGTGGTTCCATGTTAATGCATCAGAATTATGATCCTGATGACAACTTGGTGGAATCCATTATTATGCCCAAAATCTGTGATAATAGCTTTGAGGATTATGTGTTGACGAGCAGTACTAGCACTACTACAGTCCCGTCATCTTCATCTTCTTCTTCTTATTCGCAAGCTGACTTATTATTACAGGACCATCTTGCCAGATTCCATTGTTACCCATCATCTTCTGGTTTTTGTCCTCAAGATCATCAAACTTTCTCTGAAAATCAAATGGAGTATATTGATGCAATCCTATCATCTTTGCCCTCGTCCGTCGTCACAAACCCTATTGTTCCATCAGCTTGGAGCCATGAGTGTAGCTTAATGCAAGAGAATATACAACAAAAGTCGTACAAAGATGCTATGGTCAACTCTGAAGCACAAGAGGCCAAACTGTCCTATAATATAATGTTGCCACCCATTAAGGTTCTTAGCTATGGTGTTCTGGCGGCTATGTCGCTTTGA 1353 0.4035 MGHHSCCNKQKVKRGLWSPEEDEKLINYISTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSSQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDHLLVPPAFSTFSDHLLLHHHAPVETFFPSSNPNNNVFLNNYSHLHQPDHHQLYIPSPIPQALPNLHHHKTDDVVKVDDIANYDPTNNNNFLHVHQNPISETTPPNNVIIPSSCEDGNNNNNNETNDKWSSILGVSNLNQENSQITKSDDLLFHHLVAEKFINPLPGGSMLMHQNYDPDDNLVESIIMPKICDNSFEDYVLTSSTSTTTVPSSSSSSSYSQADLLLQDHLARFHCYPSSSGFCPQDHQTFSENQMEYIDAILSSLPSSVVTNPIVPSAWSHECSLMQENIQQKSYKDAMVNSEAQEAKLSYNIMLPPIKVLSYGVLAAMSL 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1619 450 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Acco09g1619 450 FunFam MYB transcription factor 6 66 - -
Acco09g1619 450 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Acco09g1619 450 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco09g1619 450 CDD SANT 17 61 IPR001005 -
Acco09g1619 450 Gene3D - 11 67 - -
Acco09g1619 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Acco09g1619 450 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco09g1619 450 SMART sant 13 63 IPR001005 -
Acco09g1619 450 SMART sant 66 114 IPR001005 -
Acco09g1619 450 Gene3D - 69 116 - -
Acco09g1619 450 FunFam Myb transcription factor 69 116 - -
Acco09g1619 450 CDD SANT 69 109 IPR001005 -
Acco09g1619 450 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco09g1619 450 PANTHER MYB DOMAIN PROTEIN 55 1 323 - -
Acco09g1619 450 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1619 Acco-ChrAcco09 32561457 32563964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1619 1 118 MYB Transcription Factor Family AT3G13890 95.763 1.60e-79 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco09g1619 Myb_DNA-binding 8.3e-15 CL0123