Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1615 ATGGCATCATTGTCTCAGTTCTCTCGAATAAAACATGATGTCTTTATCAGCTTTTGTGGCACAGATACACGTTCTGGTTTTCTTAGCCATTTGAGAAAAGAATTACGGCATAAGCAAATTGACGCATGCTTGGATGATAATAATAATCAAATTGAGAGAGGAGAAGATGTAATATCATCATCAGAACTTTCTGCAGCAATAGAAGAATCATTCGTTTCACTTGTCATATTTTCAAAGAACTATGCTTCTTCAACATGGTGCTTGAAACAACTGGTGAAAATCATGGAGTGTAAGGACAGATATCAGCAGATTGTGATTCCTGTTTTCTACAACATAGATCCATCAGATGTAAGGCATCAAAAGGGGTCTTATGCAGATGCTTTAGCTCAGCATAATGACTCAAATTATTACAAGGAAGAGTTGCCAAATTGGAAACATGCTTTGACTAAAGCTGCTAATTTATCTGGATTCCATTCATTAAAGTATGGGGATGAAGCTAGGCTTATTGAAGAAATTGCCAAATCTGTGTCAAACAAGTTGAATAATGTGTATCAAAGTGACTTCACAGACCTCGTTGGAATTGATGAAAGGATTGCAGATTTAGAATCACTTATGGATCAAGGGTTAGACGATGTCCGTGTCATTGGAATTTGGGGCATGGGCGGGATTGGCAAGACAACTATTGCAGCAGCAGTGTTCAATCGACTTTAAGTGGGCAGGGAGATTGTTCGCGAAGAATCAATAAAAGATCCTGGAAAACGCAGTCGTTTATGGGATCCTGATGAAAGTTATGAAGTATTGAAAAATAATAAGGGGACCGAAACCATTCAAAGCATAAGTCTGGACATGTCAACAACTGGAGATTTGTCCTTAAATCCTCAAGTCTTTGCTAGGATGCACAAGCTGAAGTTTCTTAAAATATTTACTCGTATATCTTCCTTGGAGGCACGTGTCCATCTACCTCAAGGCCTTCAATTTTTGCCCAATGAACTCAGAATTCTTCTTTGGCAAAATTACCCTCTGAAATTCCTGCCTCCAACATTTTCTGCAGAAAATCTTGTCCAACTTGTTATGAACTATAGCAATGTGGAAAAACTTTGGGATGGAGTTGTGCCTCTTGTGAATTTGAAGAAATTTGACCTAAGGCATTCTCAGAATCTGCTAGCTCTCCCAGATTTTTCTACGGCCAATAATCTTGAATCAGTCTCACTCTTCAGTTGTAAGAACCTGCATCTTGTTCATCCTTCTATTTTATCTCTCCAAAAGCTTGAGTCCTTGGATATATCATACTGCGAAAAGCTTACCAGTCTTGTGAGTGATGTCCCTTTGAAATCCCTCCGCGCACTCCATCTAGCTTCCTGCTCAAGGCTGAAGAAATTTTCGGTGACATCAGAAAACATGAGAGAGTTAGACTTATCAGAGACAGCTATTGAGGAATTGCCATTATCCTTAGGATGTCTCAGCCAGCTTGAAACTTTATCTCTATGGCGTTGTAAAAGCCTCAAGCATCTTCCTAACAACTTAGTTGGCCTCATATCTCTGCGTCATCTTAAGGTAACTGGTTGTATGAAACTGCAATCTCTACCAGAACTTCCACCATCTGTTGAAATATTATGGGCTTCAGATTGTTCATCCTTGGCTAATGTCCCACTATCTACTGATCTACTCAACACAAACATGAAGGAAATTCGTCTGGCAAATTGCATGAACTTGGATGAAACTTTGCTCAATTATATTGGATGGAATATACATATGAAGCTGATGAATCATTATGAATTTGAACGTGTATCATCCTCAGAAGACCAGGAGAATAATCAGATTGATGATGTTTATATTCGAACTGGAGGAATATACCCAGGGAGCAAAGTTCCAAGCTGGTTCGAGCATAGTAGGACATCTCATCATGCTTCAGTAACTATTTCTCTACAATTCAATATTCCTGAGGCCTTCATTTTCTGTGTGATTCTTTCTCAGTTCCCGTTAAGCAGTTTTCTTATCTCCATCACAGTTGATTGCTTCCTGGAAAACAATAATGGTGATCAGAGGCTTCATGTTAAGTCTTTGGACCTTGTGTTGCCTGGTACAGAACTTAATTCAGATCATGTGTGTTTGTTTTACGTTCAATATTTGGGTTTTATGATTGGAAGGGTTGAAGAAAGTAGAGGGAGTGATGAACACAAGCTTTCATTCAAATTCTCAGCTCAGTCAGAGGTTGAGCAAGAAGAGGAAGATAAAGAGATTGCAATAAAGGGGTGTGGAGTTTACCCGATATATACCTTGCAAAGATGTGATCATGAGCTATGGCCATTTCCTCCATTGTTAGAAGCCAGAGAAGCCATTGATGATCCTGAAAGCTCTGCTAATGAGAAGAAAGATGAGGAAGAGGTTGTATCTGTAGCACAAAAATCCAGTGGATGTATATTTCCACCACTTCCAACTGAAACATGGAAGGAAGGAAGTCAAGGCTTGAAAGATCTCCTCAACCTCTGA 2490 0.3928 MASLSQFSRIKHDVFISFCGTDTRSGFLSHLRKELRHKQIDACLDDNNNQIERGEDVISSSELSAAIEESFVSLVIFSKNYASSTWCLKQLVKIMECKDRYQQIVIPVFYNIDPSDVRHQKGSYADALAQHNDSNYYKEELPNWKHALTKAANLSGFHSLKYGDEARLIEEIAKSVSNKLNNVYQSDFTDLVGIDERIADLESLMDQGLDDVRVIGIWGMGGIGKTTIAAAVFNRLXVGREIVREESIKDPGKRSRLWDPDESYEVLKNNKGTETIQSISLDMSTTGDLSLNPQVFARMHKLKFLKIFTRISSLEARVHLPQGLQFLPNELRILLWQNYPLKFLPPTFSAENLVQLVMNYSNVEKLWDGVVPLVNLKKFDLRHSQNLLALPDFSTANNLESVSLFSCKNLHLVHPSILSLQKLESLDISYCEKLTSLVSDVPLKSLRALHLASCSRLKKFSVTSENMRELDLSETAIEELPLSLGCLSQLETLSLWRCKSLKHLPNNLVGLISLRHLKVTGCMKLQSLPELPPSVEILWASDCSSLANVPLSTDLLNTNMKEIRLANCMNLDETLLNYIGWNIHMKLMNHYEFERVSSSEDQENNQIDDVYIRTGGIYPGSKVPSWFEHSRTSHHASVTISLQFNIPEAFIFCVILSQFPLSSFLISITVDCFLENNNGDQRLHVKSLDLVLPGTELNSDHVCLFYVQYLGFMIGRVEESRGSDEHKLSFKFSAQSEVEQEEEDKEIAIKGCGVYPIYTLQRCDHELWPFPPLLEAREAIDDPESSANEKKDEEEVVSVAQKSSGCIFPPLPTETWKEGSQGLKDLLNL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1615 829 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 157 IPR035897 -
Acco09g1615 829 Gene3D Ribonuclease Inhibitor 441 580 IPR032675 -
Acco09g1615 829 FunFam Disease resistance protein RPS4 273 465 - -
Acco09g1615 829 Pfam TIR domain 11 194 IPR000157 GO:0007165
Acco09g1615 829 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 434 577 IPR044974 GO:0006952
Acco09g1615 829 ProSiteProfiles TIR domain profile. 10 180 IPR000157 GO:0007165
Acco09g1615 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 237 IPR027417 -
Acco09g1615 829 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 182 - -
Acco09g1615 829 SUPERFAMILY L domain-like 253 576 - -
Acco09g1615 829 Gene3D Ribonuclease Inhibitor 296 440 IPR032675 -
Acco09g1615 829 PRINTS Disease resistance protein signature 214 229 - -
Acco09g1615 829 PRINTS Disease resistance protein signature 441 457 - -
Acco09g1615 829 Gene3D - 182 248 IPR027417 -
Acco09g1615 829 Gene3D - 6 181 IPR035897 -
Acco09g1615 829 SMART till_3 11 154 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1615 Acco-ChrAcco09 32531079 32534803 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1615 238 530 WRKY Transcription Factor Family AT4G12020 40.199 5.50e-53 199