Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1613 ATGGCGTATTCTTCTCAGTTTTCTGGTATAAAGTATGATGTGTTTATCAGCTTCAGAGGCACAGACACACGCCATGGTTTTCTCAGTCATTTGAAGAAGGAATTGCGCCAGAAACAAATTGACGCATACGTGGACGAGAGACTTGAAAGTGGAAATCAAATATCACTTTCACTTGTAACAGCCATCAAAGAATCACTCATGTCGTTGATCATATTTTCAGAGAATTATGCTTCTTCAAGGTGGTGCTTGGAAGAGCTGGTGGAGATTATTGAGTGTATGGAGAAGCAGAACCAGATTGTGATTCCTGTTTTTTATAACACAGATCCCTCAAATGTGAGGCATCAAAAGGGGTCTTATGAAGTTGCTTTTGTCAAACATGACAAAAATTACAAGGAAAAGGTGCCAATTTGGAAATCAGCTTTGAATAAAGTGGCTAATTTATCTGGGTTTCATTCCTCGAATTATGAGGATGAGGCTGAGCTTATAGAAGTTATTGGCAAGTGTTTGTCAACAAGGTTGAATATTATGTTCCAGAGTGACCTAACAGGCCTCGTTGGAATCGATCAAAGGATTGAAGATTTAGAATCATTAATGAACCAAGGTTCAGAAGATGTTCGAGTCATTGGAATTTGGGGCATGGGCGGTATGGGTAAGACCACTATCGCAGCTGCTGTATTTAATAGATTCTATTCTGAATATGAAGGATATTGTTTTTTGGCAAATGTGAGAGAAGAATCAGAGAATCATGGGATTATGTATTTGAAGAATAAAATTCTTTCTATACTACTTAAGGAACATGATTTGCATATTGGTACACCAAATGGGATGCCCCCTTATGTTAAGAGAAGGCTTCTTCGAAAAAGAGTTCTTGTTGTTCTTGATGATATTAGTGATTCTGATCAACTGGAAAGTTTAGTGGGGGCCCTTGATTGCTTTGGATGTGGTAGTAGAATCATTATAACAACAAGGGATAAGCAAGTGCTAGCTAAAGGAGTTGATAAAATATACGAGGTTAAGCCATTGATGTTTGATGATTCTGTTAAACTTTTTATGTCCAATGCCTTTGAGAATAGTAATTATCTAGACATGGAATGGATTGAACTATCAAGAAAGGTGATTAGTTACACTAAAGGCGTTCCGTTAGCTCTAAAAGTTTTGGGTTCCTTTCTTTACGGCAAAAGCAAGGAAGAATGGGAGAGCCAACTTGAGAAGCTCAACAAAATGCCACATGCAAAAATTCAGGATGTGATGAGATTGAGTTATGATAAGCTAGATAGGGAAGAGAAGAATATTTTCTTGTATATTGCATGTTTCCTCAAGGGTTATAAATCACAGCAAATAGTAGTTTTACTAAATGCTTGTGGTTTTTCATCAATTATCGGGCTAAAAGTCCTTCGAGACAAAGCTCTTATCGCAGAAATCAAAGGATCAAACTCAGGAGCATCAAGAACATTTATGCATGATTTGATACAGGAAATGGGTTGGGAGATTGTTCGTGAAGAATCAATTCATGATCCTGGAAAACGCAGCCGATTATGGGATGCTGATGATATATACCGAGTATTGGAACATAACCTGGGGACTAAAGCCATTCAAAGTATAACTTTGAATTTGGCAAAAATTGAAGAGCTCTGCTTAACTCCTCAAGTCTTTGCTGAGATGTCAGAGCTAAAATTTCTTAGATTTTCCCAGAATGATGCTGATGAACAAATCCTACACCTTCCTCAGGGCCTTGAATCTTTGCCAAATGAACTGAGATTTCTTCATTGGGATTGCTGTCCTTTAAAATCCTTGCCCTCCACATTCCATCCAGAAAGTCTCGTCGAACTTAACATGAATTGGAGTCGTGTGGAAAAACTTTGGGATGGAGTTCTGCATCTTGTGAATTTGAAGAAAATTGACCTCAGTAACTCCAAGCATCTATTGGAACTCCCAGATTTTTCTATGGCCTCAAATCTTGAAGAAGTTGAACTCCACAACTGCAAAAGCTTGCGTAAGGTTCATCCTTCTATTTTAACCATCCACAAGCTTGTGAATTTGAACCTAACACATTGCACGTCACTTACCATCCTTACAAGTGATGTCCATTTAAGATCCCTGAGTAGACTCTCTCTTGGTGAATGCTCAAGGCTCAAGGAATTCTCAGTGACATCAGAGAATATGAGGAACTTGAATTTGGCAGGCACAGCTATCAATGAATTGCCTCCATCCATGAGGCTCCTAAACAAACTTGAAATATTTGAATTGCATCGCTGTAAAAACCTTAAGAATCTTCCAAACAAGTCAACTAACCTAAGTTCTCTTCGAGAACTTCGGATACATAGTTGCATGCAACTTGATGCATCGAATTTACGCTTCCTACTTGATGGTTCAAGGTTCTTAGAAACATTGTTACTGCAAGATTGTCATAATTTATTTGAACTTCCAGATACCATCAGATTCCTATCCTCATTGAAGCATTTATCCCTAAATGAAACTGATATTGAGAGGTTGCCTGCAAGCATCAAGCATCTTCCTAGACTTGAAAAACTTGACTTGAGTAATTGTAGGAGGCTTCAGATTTTGCCTCATCTTCCACTAACCATTGAAGAACTATATGTCACTAACTGCACTTCCCTGGAGAGAGTTATGTTCTCTTCAATGGCTTCTGATCATCTGAACGAAAAAGTACGAGTTAACACTATATTCCAGAATTGTGTGAACTTGGATCCACGTTCACTCAGGGCTATAGGAGTAAATTCTCATGTCAACATTAAGAGATCGGTAAAGGAACACTTATCAACTCTAGGAAAAAGTAAGATCCTAGATCGTACAGTTGATGTTATTTATCCAGGAAGCAATGTTCCAGAGTGGTTCATCAACAGGACAAGGCAGTCATCAGTAACTGTTGACTTATCTTCTTCTGCTCTACCTTCCATGTATTTGGGTTTCATTTTTTGTGCGGTTGTCTGTAAGTTCCCATCAAATGACAAGAACCTTGTCGGATGTGAATGCTACTTGGAAAATAATGGCAAAAGGGACAAGAATATGGGTTCATGGACTAGCATATCTGTTTGTGAATTTATATCTGATCATGTGTGTCTATGGTATGATGAAAGATGTTGTCTGAGTACTAAAGGAAGCATGGAAGCTGATGAAACCGACAGAATGAAAATATCATTTGAGTTCTTTGCACAAACTGGGAATATTTGGGAGAAGAAAAACGATATTGTGATAAAAGAGTGTGGAGTCTGCCCCATATATGTCTCAGAAAATCACCAAGTCATTGAGCAAATGGATTTGGAGTTGGAGTCAGAGCTTAAAGCAATTGAAATGGGAGTTAGTGGAAGCTTTGGTGAGAAGAAAAATGAGGAGACAATCTCTTTAGCTCAAAAATCCAATCAATATAACTTTCCAACACTTCCAAATGGAACTTGGAAGAAAGCAACACAAGGCTTAAAAGATCTCATCAACTTATGA 3459 0.3816 MAYSSQFSGIKYDVFISFRGTDTRHGFLSHLKKELRQKQIDAYVDERLESGNQISLSLVTAIKESLMSLIIFSENYASSRWCLEELVEIIECMEKQNQIVIPVFYNTDPSNVRHQKGSYEVAFVKHDKNYKEKVPIWKSALNKVANLSGFHSSNYEDEAELIEVIGKCLSTRLNIMFQSDLTGLVGIDQRIEDLESLMNQGSEDVRVIGIWGMGGMGKTTIAAAVFNRFYSEYEGYCFLANVREESENHGIMYLKNKILSILLKEHDLHIGTPNGMPPYVKRRLLRKRVLVVLDDISDSDQLESLVGALDCFGCGSRIIITTRDKQVLAKGVDKIYEVKPLMFDDSVKLFMSNAFENSNYLDMEWIELSRKVISYTKGVPLALKVLGSFLYGKSKEEWESQLEKLNKMPHAKIQDVMRLSYDKLDREEKNIFLYIACFLKGYKSQQIVVLLNACGFSSIIGLKVLRDKALIAEIKGSNSGASRTFMHDLIQEMGWEIVREESIHDPGKRSRLWDADDIYRVLEHNLGTKAIQSITLNLAKIEELCLTPQVFAEMSELKFLRFSQNDADEQILHLPQGLESLPNELRFLHWDCCPLKSLPSTFHPESLVELNMNWSRVEKLWDGVLHLVNLKKIDLSNSKHLLELPDFSMASNLEEVELHNCKSLRKVHPSILTIHKLVNLNLTHCTSLTILTSDVHLRSLSRLSLGECSRLKEFSVTSENMRNLNLAGTAINELPPSMRLLNKLEIFELHRCKNLKNLPNKSTNLSSLRELRIHSCMQLDASNLRFLLDGSRFLETLLLQDCHNLFELPDTIRFLSSLKHLSLNETDIERLPASIKHLPRLEKLDLSNCRRLQILPHLPLTIEELYVTNCTSLERVMFSSMASDHLNEKVRVNTIFQNCVNLDPRSLRAIGVNSHVNIKRSVKEHLSTLGKSKILDRTVDVIYPGSNVPEWFINRTRQSSVTVDLSSSALPSMYLGFIFCAVVCKFPSNDKNLVGCECYLENNGKRDKNMGSWTSISVCEFISDHVCLWYDERCCLSTKGSMEADETDRMKISFEFFAQTGNIWEKKNDIVIKECGVCPIYVSENHQVIEQMDLELESELKAIEMGVSGSFGEKKNEETISLAQKSNQYNFPTLPNGTWKKATQGLKDLINL 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1613 1152 FunFam Disease resistance protein RPS4 528 719 - -
Acco09g1613 1152 ProSiteProfiles TIR domain profile. 10 173 IPR000157 GO:0007165
Acco09g1613 1152 Pfam C-JID domain 943 1084 IPR045344 -
Acco09g1613 1152 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 435 IPR027417 -
Acco09g1613 1152 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 150 IPR035897 -
Acco09g1613 1152 Gene3D Ribonuclease Inhibitor 517 719 IPR032675 -
Acco09g1613 1152 Gene3D Ribonuclease Inhibitor 720 903 IPR032675 -
Acco09g1613 1152 FunFam Disease resistance protein (TIR-NBS-LRR class) 8 175 - -
Acco09g1613 1152 Gene3D - 177 335 IPR027417 -
Acco09g1613 1152 PRINTS Disease resistance protein signature 207 222 - -
Acco09g1613 1152 PRINTS Disease resistance protein signature 836 852 - -
Acco09g1613 1152 PRINTS Disease resistance protein signature 376 390 - -
Acco09g1613 1152 PRINTS Disease resistance protein signature 283 297 - -
Acco09g1613 1152 SMART till_3 11 147 IPR000157 GO:0007165
Acco09g1613 1152 SUPERFAMILY L domain-like 486 884 - -
Acco09g1613 1152 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 12 776 IPR044974 GO:0006952
Acco09g1613 1152 Pfam TIR domain 11 186 IPR000157 GO:0007165
Acco09g1613 1152 Pfam NB-ARC domain 195 423 IPR002182 GO:0043531
Acco09g1613 1152 Gene3D - 8 176 IPR035897 -
Acco09g1613 1152 Gene3D - 341 425 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1613 Acco-ChrAcco09 32507319 32511056 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1613 6 851 WRKY Transcription Factor Family AT4G12020 34.220 3.39e-120 407