LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco09g1586	ATGAAAATGGGGTTACAGTTGATTATTCTTCTCTTTGAGCTGCATTTAGTTTTCAGTGCTCCACAACTTCTTGAGAACAGAGCCACCAATCTGCATAATTCCAGAAGCCATCCAAGTATTGCGCTTCCACCATCTCAGTCATCTTCTAGAGTTCCTGCAAGCATTGCAATTCCACCTTCCAAGTCCTTACCTCATGGTTCTGTAGATTCTCCAACATCACATCATAAACATGACCATTCCAGAAGACATTCCAGAAGCCCAACACCTATTTACAATCATGGAGTTTTTCCGGCACAGCCTCCTTTTCCTTCTCCAAAGACCAGGAATTTTCCTGCACCTGCCCCATCGCGAGCATTTTTATCAGTCCCCTTGATGAATGGTATAAACTCTCAGTTTGCTCCTTCTCCTTCTCCTTCGCCTAGAGTTCTACCGATTCATTCGTCATCAAAGCGTATGAAGAATCCATCACCATCACCTGTTTTGGCTTTGCCACCTCCACCTCCTAATAACGATTGCACGTCATTGACTTGTTCAGAGCCCCTTACATATACACCTTCTGGATCACCTTGTGGTTGTGTTTGGCCACTACAAGTTAAGCTTGACCTCGGCATTGCAATATACAAGTTCTTTCCTCTGGTTTCAAAGCTAGCTGAGGAAATTGCAGCAAGTGCTTCGCTTAACCAGAACCAAGTTCGCATTGTGGGAGCTGATGCAGCGAATCACCAACTAGAGAAAACCAATGTTCTTATAAACCTAGTACCCGAAGGAGTAAATTTCGATGATGCAACAGCATTTTCAATATATAAGAAATTCTGGCACAAGGAGATTCTCACTGATGCTTCTCTCTTTGGAGCATATGAAGTGCTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCTTCTCCTTCAAGCATCTCTAGTATGGATGATGTGCCATACCCTGGCTATGACTACAATGGAACAATAATGAAACCTTTAGGAGTAGTTGTGCCAATGAAGGAAAAGCACGGGACTAGTGAAAGAGGAAGCATAATTATAATAATTGTGTTGTCATGTATAACTTTATCTGTTCTATTCATTGGTGCTGCCTGGCTGTATCTGTTGAAGAGTGGATCTTGTGTTCAACAACCTGAATATATCCCAAATGATTCAATCCTATCATCTTCAAAACGATCAGGGGCTATCAAGTCATTGACTTATGGGAGCATACCAGATTCCAGATCAATGTCTTTCAGCTCTGGAACAATAATACATACAGGATCTGTTAGGACCTTCACTTTGAATGAAATGGAGAAAGCAACAAACAACTTTGATGCTCTTAGAATAATAGGGGAAGGTGGCTTTGGGCTTGTCTATAAAGGTGTTCTACTTGATGGAAGGGATGTGGCTGTGAAGATTCTGAAAAGGTATGATCATCATGGTGGCCGTGAATTCTTGGCCGAAGTTGAGATGCTTAGCCGCCTTCATCACAGAAATCTAGTCAAATTGATAGGTACATGCATGGAGAATCAAACACGCTGCTTAATCTATGAGCTTATCCCTAATGGAAGTGTGGAATCCCATTTGCACGGTGCTGACAAGAAAACTAGTCCACTTGATTGGAATGCCAGGATGAAGATTGCACTTGGTGCAGCGCGGGGATTGGCGTATCTCCATGAAGATTCAAATCCCTGTGTGATACACAGAGACTTCAAAGCTAGTAACATCTTGTTGGAACATGATTTTACACCAAAGGTTGCAGATTTTGGATTGGCCAGAACAGCACTAGATGAGGGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTGGCTCCGGAATATGCAATGACTGGCCATCTTCTTGTCAAAAGTGATGTGTACAGCTATGGAGTTGTACTTCTTGAACTCCTAACAGGAAGAAAGCCTGTGGATTTGTCACAGCCACCAGGTCAAGAAAACCTGGTGGCTTGGATTCGTCCGCTTCTCACGAGCAAGGAGGGTTTACAGACAATCTTAGACCCGGTTTTAGAGAGCAACGTGTCTTTGGAAGCCCTGGTAAAAGTTGCAGCTATCGCATCGACGTGTGTGCAGCCAGAAGTCTCTCAACGCCCTTTCATGGGCGAAGTTGTTCAGGGCTTGAAGTTGGTTTGCTGTGATGAGTTTGAAGATACAAGCATTATGAGATCAAGGAGCTTCCATGAAGAGAGTCTTCTAATCGATGGAGATACGAAGTTTTCAAGTATTTCAGGTGAGATGATGATGGGTTTTTCGGCATTAACAGAATCAAAGTTGCTCAGTCCATTATCAGGCCAGGGATTTGAGTCCTTTAGAAGGCATTCTGCTTCAGGGCCTCTCACTACCGAGAACAAAAGGAAGGTATGGCAAAAATTGCGAAGTTCATCAGGAGGGAGCTTTAGTGAGCATGGATTTTCAAACTTCCCCTCAAGTTGA	2448	0.433	MKMGLQLIILLFELHLVFSAPQLLENRATNLHNSRSHPSIALPPSQSSSRVPASIAIPPSKSLPHGSVDSPTSHHKHDHSRRHSRSPTPIYNHGVFPAQPPFPSPKTRNFPAPAPSRAFLSVPLMNGINSQFAPSPSPSPRVLPIHSSSKRMKNPSPSPVLALPPPPPNNDCTSLTCSEPLTYTPSGSPCGCVWPLQVKLDLGIAIYKFFPLVSKLAEEIAASASLNQNQVRIVGADAANHQLEKTNVLINLVPEGVNFDDATAFSIYKKFWHKEILTDASLFGAYEVLYVHYPGLPPSPPSSPSSISSMDDVPYPGYDYNGTIMKPLGVVVPMKEKHGTSERGSIIIIIVLSCITLSVLFIGAAWLYLLKSGSCVQQPEYIPNDSILSSSKRSGAIKSLTYGSIPDSRSMSFSSGTIIHTGSVRTFTLNEMEKATNNFDALRIIGEGGFGLVYKGVLLDGRDVAVKILKRYDHHGGREFLAEVEMLSRLHHRNLVKLIGTCMENQTRCLIYELIPNGSVESHLHGADKKTSPLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKASNILLEHDFTPKVADFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVAWIRPLLTSKEGLQTILDPVLESNVSLEALVKVAAIASTCVQPEVSQRPFMGEVVQGLKLVCCDEFEDTSIMRSRSFHEESLLIDGDTKFSSISGEMMMGFSALTESKLLSPLSGQGFESFRRHSASGPLTTENKRKVWQKLRSSSGGSFSEHGFSNFPSS	815

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco09g1586	815	Pfam	Protein tyrosine and serine/threonine kinase	442	710	IPR001245	GO:0004672\|GO:0006468
	Acco09g1586	815	MobiDBLite	consensus disorder prediction	33	55	-	-
	Acco09g1586	815	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	561	573	IPR008271	GO:0004672\|GO:0006468
	Acco09g1586	815	MobiDBLite	consensus disorder prediction	131	165	-	-
	Acco09g1586	815	PANTHER	OS01G0750732 PROTEIN	164	734	-	-
	Acco09g1586	815	ProSitePatterns	Protein kinases ATP-binding region signature.	445	467	IPR017441	GO:0005524
	Acco09g1586	815	MobiDBLite	consensus disorder prediction	33	114	-	-
	Acco09g1586	815	FunFam	receptor-like serine/threonine-protein kinase ALE2	412	514	-	-
	Acco09g1586	815	MobiDBLite	consensus disorder prediction	94	110	-	-
	Acco09g1586	815	Gene3D	Transferase(Phosphotransferase) domain 1	515	729	-	-
	Acco09g1586	815	Gene3D	Phosphorylase Kinase; domain 1	411	514	-	-
	Acco09g1586	815	FunFam	Receptor-like serine/threonine-protein kinase ALE2	515	730	-	-
	Acco09g1586	815	SUPERFAMILY	Protein kinase-like (PK-like)	418	712	IPR011009	-
	Acco09g1586	815	CDD	STKc_IRAK	445	713	-	-
	Acco09g1586	815	ProSiteProfiles	Protein kinase domain profile.	439	715	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco09g1586	Acco-ChrAcco09	32041461	32045416	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco09g1586	169	808	Receptor kinase-like Gene Family	AT5G56890	57.470	0.0	706

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_Extensin	Acco09g1586		PK_Tyr_Ser-Thr	4.3e-47	CL0016