Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1565 ATGCCGATGAGTCGCGAACAAGAGAAGCGAGCGAAGCAGGAGAAAGGCTCTGATGCTGCTGAGAAGGTTATTGTTGCCGTTAAGGCTTCAAAGGAAATTCCAAAGACTGCTCTGGTTTGGTCTTTGACTCATGTTGTTCAACCTGGGGATTGCATTACACTACTAGTAGTCGTTTCTTCACAAAGTTCAGGTAGAAGATTATGGGGTTTTCCGTTATTTGCCGGTGACTGTGCCAGTGGCCACAAGAAGTCTGCTTCAGGAACAACCTCAGAGCAGAAGTGTGATATTATCAACGATTCTTGTTCCCAGATGATCCTTCAGCTGCATGACGTCTATGACCCAAATAAGATAAATGTCAAGATTAAAATTGTTTCTGGATCACCTTGTGGAGGAGCAGTGTCTGCAGAGGCCAAGAAAGCCCATGCCAGTTGGGTCGTATTAGACAAGCATCTCAAAAATGAAGAAAAACGGTGCATGGAAGAGCTACAATGCAACATTGTAGTTATGAAGCATTCTCAACCAAAAGTACTCCGCTTGAATTTGGTTGGCTCGCGCAAAAAGGATCCTGAAGAAGCAGGCCAAGTACCTTCTGGGAAAGATGAGATGCGTGGAAAGCAAACCAAAAAGAAGAATGATTGCTTGAATTCCATTAAAGGACCAGTTGTTACTCCAATTAGCAGCCCAGAGTTGGGGACACCGTTCACAGCAACTGAAGCAGGTACTTCATCAGTTTCAAGCTCTGATTTAGGAACATCACCATATTTCATCCCAGAGACAAATGGTGAGTTGAAGAAAGAGGAAACAATCAAGGAAAATCAAGAACTTTATAATACTAATTCAGACACAGAGAGTGAAAATCAGTCCACATCCTCAGTAAGTCTGAGATTCCAGCCATGGATCACAGAATTACTTCGACAACAACAATCATCGCAGCGCACAGAAGAAGAACCCGAGAGAACATATGTTAAGCCTCATACATCTACAACCAGAGCTTTATTGGAAAAGTTCTCTAAGCTTGACAGAGAAGCTGGAATTGATATCTCAACCAGATGGAACGAGTTGGATTTCAGTGGAAATGTGAGAGAGACAATGTCATTATCCAGAAATGCCCCTCCTGGACCCCCTCCATTATGCTCAATATGTCAACACAAGGCACCTGTTTTTGGAAAACCTCCAAAGTGGTTCAGCTATGCTGAGTTGGAGCTTGCAACTGGCGGATTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATATGGATCTGTACATAGAGGGGTTCTTCCTGATGGACAAGTCATTGCCGTCAAGCAACATAAATTGGCCAGTTCTCAGGGTGATATTGAATTTTGCTCAGAGGTTGAAGTCCTAAGCTGTGCTCAGCATCGAAATGTTGTGATGCTAATTGGGTTCTGTATAGAAAATAAGAGAAGGCTGCTGGTTTATGAGTATATATGCAATGGATCACTAGATTCTCATTTATATCGGCGACAGCAAAAGCCATTGGAATGGTCAGCAAGGCAGAAAATTGCAGTTGGAGCTGCCCGAGGGTTGCGATATCTCCATGAAGAGTGCAGAGTTGGTTGCATCATCCACCGTGATATGCGGCCAAACAACATCCTCATCACCCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGAGACGCAGGTGTTGAAACTAGAGTAATTGGAACATTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGACAAATTACTGAAAAAGCTGATGTTTATTCCTTTGGAGTGGTATTAGTGGAACTTGTTACAGGACGAAAAGCTGTGGATCTCACTCGACCCAGGGGACAGCAGTGTCTCACTGAGTGGGCACGGCCACTGTTGGAAGAATGTGCCATAGAGGAACTGATTGATCCAAGGCTGGAAAATTGCTATTCAAGACAGGAGGTCAGTTGCATGCTGAATGCCGCATCATTATGCATTCGCCGAGATCCTCATTCCAGACCGCGCATGTCACAGGTTCTCCGAATACTGGAAGGTGACATGATGATGGAAACAAATTATATTTCACATTCTGGCTACGATGTGGGAAATCGGAGCAGCCGAATCTGGGCAGGGCAGCACCATTACAGTGGTCCCTTGTTAGAAGAAGAGTCGTCGGAATCGTTCAGTGGGAAGTTGTCCCTTGAGAAATACACGACCTCCTCCCATTGGAAAAGGGACAAGTTTACAAGGACTACACGTGAAGATATGTAA 2253 0.4456 MPMSREQEKRAKQEKGSDAAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVSSQSSGRRLWGFPLFAGDCASGHKKSASGTTSEQKCDIINDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGGAVSAEAKKAHASWVVLDKHLKNEEKRCMEELQCNIVVMKHSQPKVLRLNLVGSRKKDPEEAGQVPSGKDEMRGKQTKKKNDCLNSIKGPVVTPISSPELGTPFTATEAGTSSVSSSDLGTSPYFIPETNGELKKEETIKENQELYNTNSDTESENQSTSSVSLRFQPWITELLRQQQSSQRTEEEPERTYVKPHTSTTRALLEKFSKLDREAGIDISTRWNELDFSGNVRETMSLSRNAPPGPPPLCSICQHKAPVFGKPPKWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVIAVKQHKLASSQGDIEFCSEVEVLSCAQHRNVVMLIGFCIENKRRLLVYEYICNGSLDSHLYRRQQKPLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDAGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPRGQQCLTEWARPLLEECAIEELIDPRLENCYSRQEVSCMLNAASLCIRRDPHSRPRMSQVLRILEGDMMMETNYISHSGYDVGNRSSRIWAGQHHYSGPLLEEESSESFSGKLSLEKYTTSSHWKRDKFTRTTREDM 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1565 750 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 483 686 - -
Acco09g1565 750 ProSitePatterns Tyrosine protein kinases specific active-site signature. 528 540 IPR008266 GO:0004672|GO:0006468
Acco09g1565 750 MobiDBLite consensus disorder prediction 305 327 - -
Acco09g1565 750 MobiDBLite consensus disorder prediction 181 212 - -
Acco09g1565 750 SUPERFAMILY Protein kinase-like (PK-like) 391 684 IPR011009 -
Acco09g1565 750 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 379 482 - -
Acco09g1565 750 MobiDBLite consensus disorder prediction 181 263 - -
Acco09g1565 750 MobiDBLite consensus disorder prediction 309 323 - -
Acco09g1565 750 Gene3D Phosphorylase Kinase; domain 1 379 482 - -
Acco09g1565 750 Coils Coil 265 285 - -
Acco09g1565 750 ProSiteProfiles Protein kinase domain profile. 407 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1565 750 MobiDBLite consensus disorder prediction 228 254 - -
Acco09g1565 750 CDD STKc_IRAK 413 679 - -
Acco09g1565 750 Pfam Protein kinase domain 411 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1565 750 PANTHER OS01G0750732 PROTEIN 292 699 - -
Acco09g1565 750 FunFam Dual-specific kinase DSK1-like 14 170 - -
Acco09g1565 750 Gene3D Transferase(Phosphotransferase) domain 1 483 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1565 Acco-ChrAcco09 31820537 31824333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1565 387 748 Trihelix Transcription Factor Family AT1G70460 45.822 1.47e-98 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Acco09g1565 Pkinase 2.6e-41 CL0016