Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1562 ATGAAGGCTAGAGTGTCTAGTTTTCCAGGGGATTTCTCATGGATTTGCCTCAAAGATTTTGATTTCACTTCCTTCTGCACTCAAAGGAGCATCATTGACGCTGAGAATATACTCTTTGTCTGTGCTTTTTACATATTTTTTATCAGCAGTTTGATCAGAAGAAAGTATGAAAATGCCTTGCACAGAAAGGGATGGGTTTGTTTAGCTGTCTCAGCTTATTGTGCCCTTATAAGCATTGCATATTTCAGTAACTCTGCGTGGAATCTTACAGCAAAATCTGAAGATTTTAGGAAGTTGGGGTGGTTAGTTTATTTTTTCCGAGGATTAGTTTGGATTTCTATAACAATCTCCTTGCTTGTTCGGAGATCTAAATGTATTAATATTCTAAACTCTGTTTGGTGGGCTTCTTCATGCATACTTGTTTCAGCTCTCAATATTGAGATTCTGTTCAAAGAGCATAAAATTCAAATATTTGATATGGTTAAATGGCCTGTACATTTTGTACTCATTTTTTGTGCTTTCCAAAGCCTATATTCTATTCCTCAAAGCGTTCAAAATGCCAATATTTCAGAGCCCCTTTTAAGTCAAAATCAAAAGGTTGAAAACAAACAAACAAAATTTTCTCATGCCAGTCTTCTCAGCAAATTGATTTTCTCTTGGATTAATTCCTTATTGAGTTTGGGCTACTCCAAGCCACTAGCTCTTGAAGATATCCCATCTCTTGTTTCTGAAGATGAAGCTGCTGTAGCCTATCAAAAATTTTCTCATGCATGGAATTCCTCTTTAGGAGATAGAAGCAAAAACAATAATACCAAAAACTTGATTATTTGGTCTATATCAAGAGTTTACTTGAAAGAGAACTTTCTTATAGCAATCGGGGCATTACCCAGGACAATTGCTGTCGTAGTTTCTCCTTTGTTGCTCTATGCTTTTGTGAACTATACAAATGGTAAAGAGGAAGATCTAAAAGAAGGTCTTGCCATATTGGGTTGCCTGTTTATCTGTAAGGTCATTGAGTCTTTGCCTCAAAGACACTGGCATTTTGACTCAAGAAGGTTGGGAATGAGAATGAGATCAGCTCTAATGGTGGCAATATATGACAAGCAGTTGAAGCTTTCAAGTGCAGCCAGAAGAAGACATTCAACTGGGGAAATAGTAAATTACATTGCAATTGATGCTTATAGAATGGGAGAATTTCCTTGGTGGTTTCATAACACATGGACTTATTCATTACAACTTTTTCTATCTATTGGGGTTCTATTTGGTGTTGTTGGTCTTGGTGCTTTTCCTGGTTTAGTCCCTCTTCTCATATGTGGCTTTCTTGATATACCCTTTGCAAGTATTCTTCAAAAGTGCTACTCAGAATTTATGGTTGCCCAAGATGAACGTCTAAGGTCAACTTCAGAGATACTAAATAATATGAAAATCATAAAGTTGCAATCTTGGGAGGAAAAGTTCAGGACTTTGGTGGAAACCCTTCGTGCCAAAGAGTTCAAATTTCTGTCCAAGGCACAATTTTTGAAGGCTTACTCATCATCAACCTATTGGATTTCTCCTACCATTGTTTCATCTGTAATCTTCATAGGATGTTCTCTTTTCCAAAGTGCCCCTTTGAATGCTGGAACTATATTCACAGTTCTTGCAACCTTGAGGAGCATGGGTGAACCTATTAGAATAATCCCAGAGGCTATTTCTGTGCTGATCCAAGTTAAGGTTTCTCTTGATCGTCTCAACTCCTTTTTGCTTGATGATGAGCTAAATGATGAAGATATTGGAAGAAATTCAACGGAAAGTTCAGTTAATTGTGTCGGAATCCAAGGTGGAAACTTCAGTTGGGATCTGGAATCAAGGTCTCCAACTTTGAGAGATTTGAATGTAGAAACCAAATGGGGGCAGAAAATTGCAGTTTGTGGACAAGTTGGAGCTGGAAAATCATCCCTCATACATGCAATACTTGGAGAGATGCCCAAAATTTCAGGAACTGTTAGAGTGGGTGGAAGCATAGCCTATGTTTCTCAAACATCTTGGATTCAAATCGATGCACACACTGCTACTATTCTGTTTAATGATTGTGTTATGACTGCTCTAAGGGAGAAAACTGTCATTCTAGTGACTCATCAGCTCGAGTTTCTTGCACAAGTTGATAAAATCTTGGTAATGGAGGGTGGAATAGTTACAGAATCAGGATGTTATGAAGATCTTATGATAGAAGGGAAAACATTTAAACAGCTTGTAGATGCCCATAGAGCAGGAATATCATCAGGGTCTGATGAAAACAATGAAATTCCAAAAGAATCTGAAGATGAAGTTAGTGTTCATCAGCCATTGGAGTTTCATGACTTTAATGTCACTATGGATCAAATTTGTGAGGAGGAGACTTGCACAAAAGTTCAAATTGGGGTACAACAACTTACACAAGAAGAAGAAAAGGAGATTGGTGATATTGGCTTGAAGCCATTCTGGGATTATCTTTATCTCTCTAAAGGATCTTTAATGCTTATGGGTTTGAGCATTTTAGCAGAGTTGACTTTTATTGCTCTGCAGTCAGTATCAATCTTTTGGCTTGCTTTGGCCATTGAATTCCCAAATGTGACAAATGCCATCTTGATCGGAGTTTACACAATAGTTTCACTACTAGGTGTTGTCTTTGCTTGCTTAAGGTCTATCATCAGTGCTCATCTTGGATTAAAAGCTTCTACATCTTTCTTCTCTCGTTTCAATAATGCTATCTTCAAGGCCCCTATGCTTTTCTTTGACTCAACCCCAGTAGGGAGGATTATTACCCGAGTTTCATCAGATTTGAGTATTTTAGACTTTGATATACCTCATGCCATGGACGTTGCAACAGCGGGTGGAATTGAACTCCTAACAACCATCGGGATAATGGCTTCGGTAACGTGGCAAGTACTTATTGTTGCAGTTCCAGCCTTAATAGGTTCTAAATACATTCAGGGCTATTATCAAGCATCTTCAAGGGAACTAATGAGGATAAATGGAACCACAAAAGCTCCAATTATGAATTTCTCAGCTGAAACATCACTTGGACTTGTCACTATGAGAGCTTTCAACATGGCAGACAGATTTTACCAAAACTACCTTAAGCTTGTGGACATAGATGCAAAACTATTCTTTCATTCTGCTGCATCCCTAGAGTGGTTAATTTTGAGGATTGAAGCACTCCAAAATTTGACACTTTTCACTGCAGCTTTAGTGCTTGTTCTTCTTCCAAAGGGATATTTGTCTCCTGGCCTTGTAGGACTTTCTCTATCATATGCTTTGACTTTGACAGGAACCCAAATTTTTACTACTCGTTGGCTTTGCAACTTATCAAATTATATTATTTCTGTTGAAAGAATTAGTCAGTTCATTCACTTACCAGAAGAGCCTCCTGCAATTGTGGAGAACAGACAACCTCCACTTTCATGGCCTTCCAAGGGTAGGATTGAGCTTCAAAATCTTGAGATAAGGTATCGTCCAAATGCTCCATTAATCCTTAAGGGAATAACCTGTACATTTAAAGAAGGGAGTAGAGTGGGAATTGTAGGAAGGACTGGAAGTGGAAAAAGTACACTTGTAAGTGCTTTGTTTCGCTTGGTTGATCCTGAAAGAGGAGATATTATTATAGATGGGATTAGCATATTACCAATGGGTTTGAAGGATTTGAGAATGAAGCTTAGCATTATTCCTCAAGAACCAGCTCTCTTCAGAGGAAGCGTTAGAGCCAACTTGGATCCTATAGGCCTCTACTCTGATAATGAAATTTGGGAGGCTTTAGAGAAATGCCAGCTTAAGTCAACAATCGCGAGACTGCCAAATCTATTGGACTCTTCTGTGAACGATGAAGGTGAGAATTGGAGTGTGGGACAACGTCAACTGTTATGCCTGGGAAGAGTAATTCTGAAGAGAAATAAGATTCTTGTTCTTGATGAAGCTACTGCTTCCATTGATTCTACCACGGATTCCATTCTACAAAGAGTTATCAGACAAGAATTTGCGGGGTGCACAGTTATAACTATAGCTCATCGAGTTCCTACTGTTACAGACAGCGATATGGTTATGGTCCTCTCTTATGGGAGAGTGGTGGAATATGATGAGCCTTCAAAGCTTATGGAGACAAACTCTTGCTTCTCTAAACTTGTTTCTGAGTATTGGTCCAGCCGCAATAAGAACCTTCCTCAAAATTTTTAA 4188 0.3849 MKARVSSFPGDFSWICLKDFDFTSFCTQRSIIDAENILFVCAFYIFFISSLIRRKYENALHRKGWVCLAVSAYCALISIAYFSNSAWNLTAKSEDFRKLGWLVYFFRGLVWISITISLLVRRSKCINILNSVWWASSCILVSALNIEILFKEHKIQIFDMVKWPVHFVLIFCAFQSLYSIPQSVQNANISEPLLSQNQKVENKQTKFSHASLLSKLIFSWINSLLSLGYSKPLALEDIPSLVSEDEAAVAYQKFSHAWNSSLGDRSKNNNTKNLIIWSISRVYLKENFLIAIGALPRTIAVVVSPLLLYAFVNYTNGKEEDLKEGLAILGCLFICKVIESLPQRHWHFDSRRLGMRMRSALMVAIYDKQLKLSSAARRRHSTGEIVNYIAIDAYRMGEFPWWFHNTWTYSLQLFLSIGVLFGVVGLGAFPGLVPLLICGFLDIPFASILQKCYSEFMVAQDERLRSTSEILNNMKIIKLQSWEEKFRTLVETLRAKEFKFLSKAQFLKAYSSSTYWISPTIVSSVIFIGCSLFQSAPLNAGTIFTVLATLRSMGEPIRIIPEAISVLIQVKVSLDRLNSFLLDDELNDEDIGRNSTESSVNCVGIQGGNFSWDLESRSPTLRDLNVETKWGQKIAVCGQVGAGKSSLIHAILGEMPKISGTVRVGGSIAYVSQTSWIQIDAHTATILFNDCVMTALREKTVILVTHQLEFLAQVDKILVMEGGIVTESGCYEDLMIEGKTFKQLVDAHRAGISSGSDENNEIPKESEDEVSVHQPLEFHDFNVTMDQICEEETCTKVQIGVQQLTQEEEKEIGDIGLKPFWDYLYLSKGSLMLMGLSILAELTFIALQSVSIFWLALAIEFPNVTNAILIGVYTIVSLLGVVFACLRSIISAHLGLKASTSFFSRFNNAIFKAPMLFFDSTPVGRIITRVSSDLSILDFDIPHAMDVATAGGIELLTTIGIMASVTWQVLIVAVPALIGSKYIQGYYQASSRELMRINGTTKAPIMNFSAETSLGLVTMRAFNMADRFYQNYLKLVDIDAKLFFHSAASLEWLILRIEALQNLTLFTAALVLVLLPKGYLSPGLVGLSLSYALTLTGTQIFTTRWLCNLSNYIISVERISQFIHLPEEPPAIVENRQPPLSWPSKGRIELQNLEIRYRPNAPLILKGITCTFKEGSRVGIVGRTGSGKSTLVSALFRLVDPERGDIIIDGISILPMGLKDLRMKLSIIPQEPALFRGSVRANLDPIGLYSDNEIWEALEKCQLKSTIARLPNLLDSSVNDEGENWSVGQRQLLCLGRVILKRNKILVLDEATASIDSTTDSILQRVIRQEFAGCTVITIAHRVPTVTDSDMVMVLSYGRVVEYDEPSKLMETNSCFSKLVSEYWSSRNKNLPQNF 1395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1562 1395 Gene3D - 1131 1382 IPR027417 -
Acco09g1562 1395 SUPERFAMILY ABC transporter transmembrane region 818 1130 IPR036640 GO:0005524|GO:0016020
Acco09g1562 1395 Gene3D - 679 773 IPR027417 -
Acco09g1562 1395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1138 1381 IPR027417 -
Acco09g1562 1395 SUPERFAMILY ABC transporter transmembrane region 276 583 IPR036640 GO:0005524|GO:0016020
Acco09g1562 1395 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 836 1097 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g1562 1395 FunFam ABC transporter C family member 10 271 585 - -
Acco09g1562 1395 Pfam ABC transporter 621 666 IPR003439 GO:0005524
Acco09g1562 1395 Pfam ABC transporter 1165 1313 IPR003439 GO:0005524
Acco09g1562 1395 CDD ABCC_MRP_domain2 1146 1366 - -
Acco09g1562 1395 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 550 736 IPR027417 -
Acco09g1562 1395 CDD ABC_6TM_ABCC_D1 289 577 IPR044746 GO:0140359
Acco09g1562 1395 Gene3D - 602 678 IPR027417 -
Acco09g1562 1395 FunFam ABC transporter C family member 5 797 1129 - -
Acco09g1562 1395 FunFam ABC transporter C family member 3 1131 1382 - -
Acco09g1562 1395 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 679 1385 - -
Acco09g1562 1395 CDD ABC_6TM_ABCC_D2 830 1123 IPR044726 GO:0140359
Acco09g1562 1395 SMART AAA_5 1174 1367 IPR003593 GO:0016887
Acco09g1562 1395 SMART AAA_5 630 725 IPR003593 GO:0016887
Acco09g1562 1395 Gene3D ABC transporter type 1, transmembrane domain 798 1129 IPR036640 GO:0005524|GO:0016020
Acco09g1562 1395 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 288 569 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g1562 1395 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1148 1382 IPR003439 GO:0005524
Acco09g1562 1395 Gene3D ABC transporter type 1, transmembrane domain 275 587 IPR036640 GO:0005524|GO:0016020
Acco09g1562 1395 Pfam ABC transporter transmembrane region 317 549 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco09g1562 1395 Pfam ABC transporter transmembrane region 833 1098 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1562 Acco-ChrAcco09 31754634 31764571 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1562 1127 1380 Calmodulin-binding Proteins AT2G36910 33.846 1.26e-35 146