Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1549 ATGAAAAAGGGGAAAGTGTTAGAGGTCATAGTCATTGTTGTCCATCTGCATTGGCGGGGCCACTGTTGTTGTCGGGAGTGGGGTAAGGCTAGTGAATTGCTAGAGGTTGCGCATGGTGAGTCCAACTGTTGGCACTTGACACTGTCTTCGTCGCGCGTTCACTTCCCTGAACAAGCGGAAGCCTTTAGGTTGGTTTTTGGCTCTTGTATGCTAGAAAAAGAGAAGATGGCCACAGTATCAGGGCAGCTCATATGGGAGATCGTGAAGAAGAACAACTGTTTTTTGGTTAAAGAGTTTGGCAGGGGCACTCAGAGCGTTGAGTTCAGCAAAGAGAGCAATAATCTCTACAATCTCAACTCTTTCAAGCACTCCGGTTTGGCAAACAAGAAGACCGTCACTATTCAACCCGCGGGTAAAGAACAATCTGTGTTGCTTGCAACTACCAAGACAAAGAAACAGAACCAGCCTGCCTCTTTGCTTCATAAATCTGTCATGAAAAAGGACTTCCCAAGAATGGCAAAGGCTGTGGTAAACCAGGTGGCAGACAACCACTACAGGCCTGATCTCAAGAAGGCAGCCCTTGCAAGGTTGAGTGCTGCTCATAGGAGCATCAAAGTTGCCAAGTCTGGTGTTAAGAAGAGGAACAGACAGGCTGTCAAGGCCCGTGGCAGAAAGTGA 678 0.4779 MKKGKVLEVIVIVVHLHWRGHCCCREWGKASELLEVAHGESNCWHLTLSSSRVHFPEQAEAFRLVFGSCMLEKEKMATVSGQLIWEIVKKNNCFLVKEFGRGTQSVEFSKESNNLYNLNSFKHSGLANKKTVTIQPAGKEQSVLLATTKTKKQNQPASLLHKSVMKKDFPRMAKAVVNQVADNHYRPDLKKAALARLSAAHRSIKVAKSGVKKRNRQAVKARGRK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1549 225 Pfam Ribosomal L28e protein family 83 203 IPR029004 -
Acco09g1549 225 PANTHER 60S RIBOSOMAL PROTEIN L28 76 225 IPR002672 GO:0003735|GO:0005840|GO:0006412
Acco09g1549 225 FunFam 60S ribosomal protein L28 80 208 - -
Acco09g1549 225 Gene3D - 80 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1549 Acco-ChrAcco09 31624107 31628909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1549 76 218 Cytoplasmic Ribosomal Protein Gene Family AT2G19730 73.427 4.91e-75 221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco09g1549 09 31624107 31628909 Acco07g0498 07 5977124 5980503 CCT
Acco07g0498 07 5977124 5980503 Acco09g1549 09 31624107 31628909 ECH
Acco09g1549 09 31624107 31628909 Acco09g1549 09 31624107 31628909 ECH