Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1532 ATGACCCGTGTTAACTTGGGTATGTCTGAAGACCTTGGATTGATCAGATATGCAGATGATATCTATGGTAGGTCCTGGTTCAATGGAAACATAGACAACTCCGTGAGATTCTCCACATCAGAAGCAATTAACAGTGATGTAAAAGAGTACAGACTACCAAATGAAGTGTTAAGAACTGCAGTCAAAGCACTGAATGTTTCGTCTTCCTTATATATAAAATTGAAATTGATTAATTTTACAGCAGATAGCGAACACTATGTTTACCTTCATTTTTTTGATTTCGAGGAGCATTCTAAGAGTCAAGTAAGAAGCATGGAAATTACTTTCACTGATACGATCCAAGAGATTGTAACTCTTAAATACCAGGATGTCTATACCTTGGTTAGGAGAATTCCAAAAGGGGTTAACATAACTCGTATTTCAATCACATCAGCCTCAGGTTCTGGTTTACCCCCCATGATCAATGCTTATGAGATTTATAGAGCACTACCCCAAACTAATACCCCAACTCATGAAGGAGATGTTGATGCAATGCGAGAGATCAAACATGCTTATAATAACATCATGAGAATCAGTTGGCAAGGTGATCCTTGCATGCCAAAAGATTATAGATGGCAGGGCGTGGCTTGTAATTACTCTGAGAGCATTCCAAGGGTCACTTCTTTGAACATGAGCTCAAGCAAAATGACAGGACAGATTGTAACTTCATTCTCCAAACTCATGACGTTGGAGACCTTGGATTTGTCGAACAACCAATTAACTAGAGACATACCAGAATCCTTGGCAGAACTACACAATTTGAAACTGCTTAATTTGAGAGGGAATAATCTCACAGGCTCAATTCCCATGGCTCTGAGAATTAAGAAAGTATTATTGTCATCCAAGAAAGATGGTCAGATTAAATCAAAGAATCAAGGATTTTCTCAAGCTGAAGTTCATAGAATTACTAATGACTTTGAAACTGAAATTGGAGAAGGGGGCTTTGGAAAGGTGTACCTTGGAAGACTTAAAGATGGATCACAAGTTGCGGTCAAGTTACTTTCTAAGTCATCACAGCAAGGGTTTAACGAGTTTCAATCAGAGGTAAAACTGTTGTCCTTTATTTATCATAAAAATCTAGTTTCTCTTGTTGGCTTTTGTGATGATGGTGACATGAGAGCGCTGATTTATGAATACATGGGAAAGGGAAATCTCCGGAACCTACTGTCAGCAATCACGTGA 1221 0.3841 MTRVNLGMSEDLGLIRYADDIYGRSWFNGNIDNSVRFSTSEAINSDVKEYRLPNEVLRTAVKALNVSSSLYIKLKLINFTADSEHYVYLHFFDFEEHSKSQVRSMEITFTDTIQEIVTLKYQDVYTLVRRIPKGVNITRISITSASGSGLPPMINAYEIYRALPQTNTPTHEGDVDAMREIKHAYNNIMRISWQGDPCMPKDYRWQGVACNYSESIPRVTSLNMSSSKMTGQIVTSFSKLMTLETLDLSNNQLTRDIPESLAELHNLKLLNLRGNNLTGSIPMALRIKKVLLSSKKDGQIKSKNQGFSQAEVHRITNDFETEIGEGGFGKVYLGRLKDGSQVAVKLLSKSSQQGFNEFQSEVKLLSFIYHKNLVSLVGFCDDGDMRALIYEYMGKGNLRNLLSAIT 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1532 406 ProSiteProfiles Leucine-rich repeat profile. 242 265 IPR001611 GO:0005515
Acco09g1532 406 FunFam Leucine-rich repeat receptor-like kinase 173 303 - -
Acco09g1532 406 Gene3D Phosphorylase Kinase; domain 1 323 394 - -
Acco09g1532 406 Pfam Malectin-like domain 2 161 IPR024788 -
Acco09g1532 406 SUPERFAMILY Protein kinase-like (PK-like) 301 405 IPR011009 -
Acco09g1532 406 Gene3D Ribonuclease Inhibitor 175 298 IPR032675 -
Acco09g1532 406 ProSiteProfiles Protein kinase domain profile. 317 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1532 406 Pfam Protein tyrosine and serine/threonine kinase 319 403 IPR001245 GO:0004672|GO:0006468
Acco09g1532 406 SUPERFAMILY L domain-like 170 285 - -
Acco09g1532 406 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Acco09g1532 406 PANTHER OS07G0107800 PROTEIN-RELATED 2 400 - -
Acco09g1532 406 FunFam Leucine-rich repeat receptor-like protein kinase 295 392 - -
Acco09g1532 406 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1532 Acco-ChrAcco09 31431003 31435357 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1532 14 404 Receptor kinase-like Gene Family AT1G51880 34.820 9.96e-75 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1532 Malectin_like 5.1e-24 CL0202