Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1528 ATGAAGATGGCACCATTATGGATTGTGGCTTTGCTTGTGTCTGTCTCTTGCATCATTGACCTTCGAGATTCAGCACAGGTTGTTCCATCAGATGGTGGTGATACTGATCCAAGCCGGGTGATAAGCATTGATTGTGGGGTAACTCAAGAAATTTGGGATGCAAATGGATTCTTTCATGATGCAGATGACGCACAATTTGTAGAATCTGGCAAAACATATAATGTATCTTCTAATGACACTTTTGATTATAGCCAAGAGCAAGTTTCGGAACAGATGAAAACGGTGAGGACGGCCTCTAGTTTGCTGCCATTAGGTCTCTTGACAGGTGTTAATTTGGGTATGTCTGAAGGCCTTAACTTTATCAGATATGCAGATGATATCTATGGTAGGTCCTGGCACAATGGAAAGATCGACAACTCAGAGCGATTCTCCACATCAGAAGCAATTGAAAGTGATGTGAAAGAGTACAGATTACCAACTGAAGTGTTAATAACTGCAGTGCGACCACTGAATAATGTTTCGTCTTCCTTATATATCAACTTGACCTCCATTAATGTTACAGCAGATAGCGAATACTATATTTACCTTCATTTTTTTGATTTCGAGGAGCATCCTAAGGGTCAAGTAAGAAGCATGGAAATTACTTTCACTGATACGAGCCGAGAGCCTGTAACTCTTAAATACCAGGATGTTTATACCTTGGTTAAGAGAATTCCAAAAGGGGTTGCTTTAAAGGGTATTTCAATCACATCGACCCCGGGTTCTGGTTTACCTCCCATGATCAATGCTTATGAGGTTTATAGAGCACTACCCCAACCAAATACCCCAACTCATGAACAAGATGTTGATGCTATGCGGGACATTAAGCATGCTTATAACATCATGAGAATCAGTTGGCAAGGTGATCCCTGCATGCCAAAAGAGTATAGATGGGAAGGTGTGACTTGCAATTACTCTGAGAACATTCCAAGGGTCACTTCTTTGAACATAAGCTCAAGCAAATTGACAGGACAGGTTGTACCTTCATTATCCTATCTCATGACGTTGGAAGCCTTGGATTTGTCGAACAACCAATTAACAGGAGAAATACCAGAATCTTTAGCAGAACTACCCAATTTGAAACTGCTTAATTTGACAGGGAATAATCTCGCAGGCACAATTCCGAAGGCTCTGAGGAAGAAGACAGATTTAACTTTGATTTTGGATGGAAATCCAGATCTCTGTCGGGCAGATTCTTGCAAAACCATTACAAAAAAGTTCATAAAACCACTTGTTGCATCCCTAGCTTCTGTGGCAGTTCTTGCCATAATTGTCTGCATTACTTTGATGCTCTCCAAACATAAAAGAACTAAGAAAGTATTGTCGTCCAAAAAAGATGGTTCAAAATTAATGCAGGCAAAACTGTTGTTCTTTATTTATCATAAAAATCTAGTTTCTCTTATTGGCTATTGTGATGATGGTGACATGAGAGCACTGATTTATGAATACATGGCAAAGGGAAATCTCCGGAACCTGCTATCAGAGAAGAACCCAGATATTTTGACGTGGAATGAGAGACTTAAAATTGCATTGGATGTGGCATGTGGATTGGACTATCTACATAATGGTTGCAAACCACCAATAATTCACAGAGACCTAAAATCTTCTAACATCTTGCAAAGTGAAAACATGCATGCCAAAATTGCTGATTTCGGACTTTCTAAAGCTTTTGCTAATGATACTGACACTCATATTTCAACTCGACCTGCTGGCACACTGGGCTACCTTGATCCTGAGTTCCATAGATCTGGGAACTTGAACAAAAAAAGTGATATTTATAGTTTTGGGATAATTCTGCTTGAGCTAATGACTGGACAGCGAGCAATAACCGAAACATCTGATGAAGGGACACGTCACATATCTGATTGGATCAATCCAAAGCTTGAAACTGGGGATATACAATCCATTGTAGATCCAAGATTAGAAGGAAAATTCAATACTGCTTCAGCATGGATGTTTCTAGAGATAGCCATTTCTTGCATTACACCAGAAGCAATCAAGAGGCCTGATATAAGTTCTGTTGTAATTGATCTAAAGCATTGTTTGGCTTTGGAAACATCACTTGTTGAAAGTGCAGAAAGCAGCAGCAGTTTAATCTCAAGAACTACATTGGAAACGAGTTATTCTCAGTCTGCATCATTATACTCACCTCCATCTGCTAGGTAG 2205 0.3959 MKMAPLWIVALLVSVSCIIDLRDSAQVVPSDGGDTDPSRVISIDCGVTQEIWDANGFFHDADDAQFVESGKTYNVSSNDTFDYSQEQVSEQMKTVRTASSLLPLGLLTGVNLGMSEGLNFIRYADDIYGRSWHNGKIDNSERFSTSEAIESDVKEYRLPTEVLITAVRPLNNVSSSLYINLTSINVTADSEYYIYLHFFDFEEHPKGQVRSMEITFTDTSREPVTLKYQDVYTLVKRIPKGVALKGISITSTPGSGLPPMINAYEVYRALPQPNTPTHEQDVDAMRDIKHAYNIMRISWQGDPCMPKEYRWEGVTCNYSENIPRVTSLNISSSKLTGQVVPSLSYLMTLEALDLSNNQLTGEIPESLAELPNLKLLNLTGNNLAGTIPKALRKKTDLTLILDGNPDLCRADSCKTITKKFIKPLVASLASVAVLAIIVCITLMLSKHKRTKKVLSSKKDGSKLMQAKLLFFIYHKNLVSLIGYCDDGDMRALIYEYMAKGNLRNLLSEKNPDILTWNERLKIALDVACGLDYLHNGCKPPIIHRDLKSSNILQSENMHAKIADFGLSKAFANDTDTHISTRPAGTLGYLDPEFHRSGNLNKKSDIYSFGIILLELMTGQRAITETSDEGTRHISDWINPKLETGDIQSIVDPRLEGKFNTASAWMFLEIAISCITPEAIKRPDISSVVIDLKHCLALETSLVESAESSSSLISRTTLETSYSQSASLYSPPSAR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1528 734 Pfam Leucine rich repeat 323 383 IPR001611 GO:0005515
Acco09g1528 734 Pfam Protein tyrosine and serine/threonine kinase 455 628 IPR001245 GO:0004672|GO:0006468
Acco09g1528 734 Gene3D Phosphorylase Kinase; domain 1 443 497 - -
Acco09g1528 734 SMART serkin_6 434 695 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1528 734 SUPERFAMILY Protein kinase-like (PK-like) 447 691 IPR011009 -
Acco09g1528 734 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Acco09g1528 734 Gene3D Ribonuclease Inhibitor 282 410 IPR032675 -
Acco09g1528 734 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 497 704 - -
Acco09g1528 734 ProSiteProfiles Protein kinase domain profile. 373 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1528 734 Pfam Malectin-like domain 114 268 IPR024788 -
Acco09g1528 734 Gene3D Transferase(Phosphotransferase) domain 1 498 715 - -
Acco09g1528 734 FunFam Leucine-rich repeat receptor-like kinase 280 410 - -
Acco09g1528 734 SUPERFAMILY L domain-like 307 401 - -
Acco09g1528 734 PRINTS Leucine-rich repeat signature 370 383 - -
Acco09g1528 734 PRINTS Leucine-rich repeat signature 349 362 - -
Acco09g1528 734 PANTHER OS07G0107800 PROTEIN-RELATED 104 700 - -
Acco09g1528 734 ProSiteProfiles Leucine-rich repeat profile. 348 371 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1528 Acco-ChrAcco09 31389837 31397338 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1528 121 711 Receptor kinase-like Gene Family AT1G07560 38.636 7.78e-141 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1528 PK_Tyr_Ser-Thr 3.5e-37 CL0016