Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1520 ATGGATATATGTATAGGACACGAACTCAGTAAAACGGGAGGGAGGGAACTGAGAATGGAACTTGGTTCAATGGCTTCAATAATAGAGATAGCCAGAACTGGGAAGTCACAAAGTTGTCGAAGGGGGAGACAAAGATTAAGGATGACGGAAATGATGATGAGGGTGACGACAAAACAGAAGAACGAGCGATGGAAAGTGATGGATGGGTCCAGCGGTTATTGTGATGGACAAGACAGAGCAAGACGGAGATCGGAGGCTCGGAACGTCGTCGGACACCGTGAGAAAGATGGCTCAATCTTGGTAGCTTCAGTCTCCAAAGCCATCACTGATCACGACTCAGGCTACATAGGAATAGATTGTGGAGTTGAGGAGGCATACCAAGACAGTGAGAGCAATATGTGGGATTTATCATATAACAAATTGACAGGAGAAGTGCCTGAATATTTTGCAGAGTTGCCTGATTTGGAAGTCCTTTTGGAAGGAAATCCAGATCTTTGTCTGGCTGAATCATGTGAGACAAAGAAGCATGCAACCCTCCTCGTTGCTTGTATAGCAGCATCAATATTTGTTTTAGCATTGACCTTACTTATTTATCTGATGAACATGAGAATCAAGAGGAAGAAACAAGGAGATTTGTTGACTTTTGTTCACCATAAAAACTTGGTATCTTTTGTGGGTTACTGTGAAGAAGGTGATGTGAAAGCATTGATTTATGAATATATGGCAAAGGGGAATCTGCAACAGTTATTGTCAGATAAAAATCCAACTATTTTGAAGTGGCTTGAGAGACTTCAAATCGCAGTTGATGTCGCACTTGGATTGGACTATTTGCATTATGGACAGCCTGCAATGAAAGAAGTGTCACTTGGAATCAAGATACAATTACTTGATTGGGTTAATCCAAAACTTAACAACGGAGATATTGAAGCCATAGTTGATCCAAGGTTAGAAGGACATTACAATAGAAGTTCAGCATGGAAACTTGTAGAAATTGCCATGTCCTGCACCCAACCTACTGCAATCCAAAGGCCTGACATAAGTGAAGTGTTAACTGAGCTAAAGGACTGTTTGGCTTTAGAACTAACCCATGAAAGATCAGAGAGCAGCATGAGAAGGTCTGGCGATAATTCTTCATCAGATACGAGTTGTTTGAATCCTTCTCATTTTGATTCATCATCATCAGTCCCACATGCTAGATAA 1200 0.4125 MDICIGHELSKTGGRELRMELGSMASIIEIARTGKSQSCRRGRQRLRMTEMMMRVTTKQKNERWKVMDGSSGYCDGQDRARRRSEARNVVGHREKDGSILVASVSKAITDHDSGYIGIDCGVEEAYQDSESNMWDLSYNKLTGEVPEYFAELPDLEVLLEGNPDLCLAESCETKKHATLLVACIAASIFVLALTLLIYLMNMRIKRKKQGDLLTFVHHKNLVSFVGYCEEGDVKALIYEYMAKGNLQQLLSDKNPTILKWLERLQIAVDVALGLDYLHYGQPAMKEVSLGIKIQLLDWVNPKLNNGDIEAIVDPRLEGHYNRSSAWKLVEIAMSCTQPTAIQRPDISEVLTELKDCLALELTHERSESSMRRSGDNSSSDTSCLNPSHFDSSSSVPHAR 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1520 399 Gene3D Transferase(Phosphotransferase) domain 1 283 379 - -
Acco09g1520 399 SMART tyrkin_6 165 353 IPR020635 GO:0004713|GO:0006468
Acco09g1520 399 MobiDBLite consensus disorder prediction 372 399 - -
Acco09g1520 399 Pfam Protein tyrosine and serine/threonine kinase 211 278 IPR001245 GO:0004672|GO:0006468
Acco09g1520 399 PANTHER OS07G0107800 PROTEIN-RELATED 208 280 - -
Acco09g1520 399 MobiDBLite consensus disorder prediction 365 399 - -
Acco09g1520 399 SUPERFAMILY Protein kinase-like (PK-like) 211 358 IPR011009 -
Acco09g1520 399 Gene3D Transferase(Phosphotransferase) domain 1 199 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1520 Acco-ChrAcco09 31242040 31251561 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1520 292 399 Receptor kinase-like Gene Family AT3G46400 41.667 3.52e-18 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1520 PK_Tyr_Ser-Thr 2.9e-11 CL0016