Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1516 ATGTTGGAGTCCCTGGACTTGTCAGATAATCACTTATCAGGAACAATACCAGAATTTCTTGCTGAATTGCCAAAGTTGAGAGTTCTTTTGGATGGTAACCCTGATCTTTGCTTGACGGAGGATCCATGCAAAAAGCATAAGTTCGTTATTCCTCTAATAGCATCTGTTTCTGCTTTGATTGTTGTAATCTTGGTTACGCTTGGAATATGGATCCTTAGAATTAAAAGACAGAAAGAAACTGGTGCGAGGGCATTAGTTTATGAGTACATGGCTAATGGTGACCTCCGCCGACATTTATCCGGGTTAGAATACCTGCATAATGGTTGCAAGCCAGCAATAGTGCACAGAGACTTGAAGACCACCAACATTTTGCTAGATGAAAATATGGAAGCTAAGATTGCTGACTTTGGGTTGTCCAGAGCTTTTGCTAATGATATTGACAGTCATGTCTCAACTCGTCCTGCTGGAACAGTTGGTTATGTTGATCCTGAGTAA 495 0.4101 MLESLDLSDNHLSGTIPEFLAELPKLRVLLDGNPDLCLTEDPCKKHKFVIPLIASVSALIVVILVTLGIWILRIKRQKETGARALVYEYMANGDLRRHLSGLEYLHNGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANDIDSHVSTRPAGTVGYVDPE 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1516 164 ProSitePatterns Serine/Threonine protein kinases active-site signature. 113 125 IPR008271 GO:0004672|GO:0006468
Acco09g1516 164 Gene3D Ribonuclease Inhibitor 1 47 IPR032675 -
Acco09g1516 164 SUPERFAMILY Protein kinase-like (PK-like) 82 164 IPR011009 -
Acco09g1516 164 SUPERFAMILY L domain-like 2 39 - -
Acco09g1516 164 Gene3D Transferase(Phosphotransferase) domain 1 60 164 - -
Acco09g1516 164 Pfam Protein kinase domain 96 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1516 164 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1516 164 PANTHER OS07G0107800 PROTEIN-RELATED 2 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1516 Acco-ChrAcco09 31157977 31160253 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1516 84 164 Receptor kinase-like Gene Family AT1G51820 57.282 2.63e-32 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1516 Pkinase 5.2e-16 CL0016