Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1514 ATGAGTAAGTTAACAGGACACATAGCTATTGCATTCTCACAGCTTACGGAGTTGGAGTCCCTCTTGTCAGATAATCCTGGCCTTTGTCTAGCGGATTCATGCAAAAAGCATACTTTTGTAATTCCACTTGCGGCTTCTGCTTCTGCTTTCGCTGTAATCTTCCTGGTTTGTTTAGGAATATGGATCTTCAAAACCAATAAATTAAAAGGGCAAAAAAGATTGAAACAGAAGAAGCTATTACATGAAATTGGAGATATTGCGGGACCATTCAATGCAAGCGGAGAAAGGAAATTTAGTGAAAGCGATAAAACAGGCCATGAAATACATATATTTGGTTTCGAAAGCATTGTTTTCGCGTCAGATAACTTCTCGTCCACAAATAAGTTAGGCGAAGGTGGCTTTGGACCTGTGTATAAGGGAAGTTTACTGGATGGTCGAGAGATAGCGATCAAAAGACTTTCTAAATGTTCAAAACAAGGCCTAACCGAATTCAAGAATGAGGTTAAATTGATTGCCAAACTGCAACATACTAACTTGGTGAGACTTTATGGGTTCTGTATTGAAGGCGAAGAAAGGATATTGATATATGAATATTTGCCCAATAAGAGTTTGGACTTCTACCTTTTCGATCACAATAATAGGATTTTATTGGATTGGAAAACACGGCTCAATATTATTCAAGGCATAGCTCAGGGACTTGTTTATTTACACAAATATTCGAGGTTGAAAGTTATTCATCGAGATCTGAAACCAAGTAATATTTTACTTGATCATGAGATGTGTCCAAAAATATCTGATTTTGGCATGGCAAGAATATTTGGGTTGACAGATTTTGAACAAGAAAATACAAATAGAGTGGTTGGAACATATGGCTACATGTCACCAGAATACGCTCTTAATGGGATTGTCTCAGTAAAAACTGATGTCTTTAGTTTTGGAGTATTGGTACTAGAGATTGTTAGTGGCAGGAAGAATGTTAGTTTCTATAACTATGAAGATTCACTCAACCTCATAGGATATGCATGGAAGTTATGGAATGAAGGAAGAGCCTTAGAGCTAGCAGATCCCTCACTAAGTGGAACGTGGAATGCTGATGAATTATTAAGATGCATAAATATTGGTCTGTTATGTGTGCAAGATCAAGCCAAAGATCGACCTCATATATTACATGTGGTTTCTTATCTCTCTAATGAAACCATTTCATTAGGTGAACCTAAGCAACCAGCATTTTTCATCAATGCAACACAAAACAAGGCCACATCACCTGCTGATATAGCAGAAAATTATTCTGCGTGTAATGTAACTATTTCAGATATCAACGGTAGATAA 1329 0.3695 MSKLTGHIAIAFSQLTELESLLSDNPGLCLADSCKKHTFVIPLAASASAFAVIFLVCLGIWIFKTNKLKGQKRLKQKKLLHEIGDIAGPFNASGERKFSESDKTGHEIHIFGFESIVFASDNFSSTNKLGEGGFGPVYKGSLLDGREIAIKRLSKCSKQGLTEFKNEVKLIAKLQHTNLVRLYGFCIEGEERILIYEYLPNKSLDFYLFDHNNRILLDWKTRLNIIQGIAQGLVYLHKYSRLKVIHRDLKPSNILLDHEMCPKISDFGMARIFGLTDFEQENTNRVVGTYGYMSPEYALNGIVSVKTDVFSFGVLVLEIVSGRKNVSFYNYEDSLNLIGYAWKLWNEGRALELADPSLSGTWNADELLRCINIGLLCVQDQAKDRPHILHVVSYLSNETISLGEPKQPAFFINATQNKATSPADIAENYSACNVTISDINGR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1514 442 Gene3D Transferase(Phosphotransferase) domain 1 199 406 - -
Acco09g1514 442 SUPERFAMILY Protein kinase-like (PK-like) 106 431 IPR011009 -
Acco09g1514 442 CDD STKc_IRAK 129 395 - -
Acco09g1514 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Acco09g1514 442 Pfam Protein kinase domain 124 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1514 442 ProSiteProfiles Protein kinase domain profile. 123 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1514 442 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 439 - -
Acco09g1514 442 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 199 403 - -
Acco09g1514 442 Gene3D Phosphorylase Kinase; domain 1 90 198 - -
Acco09g1514 442 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 90 198 - -
Acco09g1514 442 SMART serkin_6 123 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1514 Acco-ChrAcco09 31098930 31101414 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1514 104 414 Receptor kinase-like Gene Family AT4G11530 56.731 3.43e-124 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco09g1514 Pkinase 1.4e-44 CL0016