Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1512 ATGTGGCGCGAGGACTACGCTTTCAAATTGCAAGATTGGAATGTGTTCAGTAAATCTGTGGATATTAATCCCGAAAGCACAAATGACTCTTACAAATTACCAGCACGAGTTTTACAATCTGCAGCCAAATCATCGAATCGCTCCTCTGCTTTAAACCTTGACTGTAAGCTTGAGCACGAGCAAGTTAACAGGACACATAGCTATTGCATTCTCACAGCTTACGGAGCTGGAGTCCCTGTAAATAATAACTTATCAGGAACAATACCAGAATTTTTAGCTGAATTGCCAAAGTTGAAAGTCCTTAACTTGAGGGGCAACAAGCTCACGGGTTCTATTCCTAAGGCTCTTAAGGAAATATCACCAGCAACTTTGCAATTAAGATTGAAACAGAAGAAGCTGTTACATGCAATTGGAGATATTGGGATACCATTCAATGCAAACGGGGAAAGGAGATTTAGTGAAAGGGATAAAACAGGCCATGAAATACATATATTTGGTTTCGAAAGCATTGTTTTCGCGTCAGATAACTTCTCGTGCACAAATAAGTTAGGTGAAGGTGGCTTTGGACCTGTGTATAAGGGAAGTTTACAGGATGGTCGAAAGATAGCGATCAAAAGACTTTCTAAATATCACAATAATAGGATTTTATTGGATTGGAAAACACGGCTCAATATTATTCAAGGCATAGCTCAGGGACTTGTTTATTTGCACAAATATTCAAGGTTGAAAGTTATTCATCGAGATCTGAAACCAAGTAATATTTTACTTGATCATGAGATGTGTCCAAAAGTATCTGATTTTGGCATGGCAAGAATATTTGGGTTGACAGATTTTGAACAAGAAAATACAAATAGAGTGGTTGGAACATATGGTTACATGTCTCCAGAATATGCTCTTAATGGGATTGTCTCAATAAAAACTGATGTCTTTAGTTTTGGAGTTTTGGTACTAGAGATTGTTAGTGGCAGGAAGAATGTTAGTTTCTATAGCTATGAAGATTCACTCAACCTCATAGGATATGCATGGAAGTTATGGAATGAAGGAAGAGCCTTAGAGCTAGCAGATCCCTCACTGAGTGGACCGTGGAATGCTGATGAATTATTAAGATGCATAATTATTGGTCTGTTATGTGTGCAAGATCAAGCCAAAGATCGACCTGATATGTTACATGTGATTTCTTATCTCTCTAATGAAACCATTTCATTAGCTGAACCTAAGCAACCAGCATTTTTCACCAATGCAGCACAAAACAAGGCCACATCACCTGCTGATATAGCAGAAAATTGTTCTGCGTGTAATGTAACTATTTCAGATTTCAACGGTAGATAA 1329 0.3792 MWREDYAFKLQDWNVFSKSVDINPESTNDSYKLPARVLQSAAKSSNRSSALNLDCKLEHEQVNRTHSYCILTAYGAGVPVNNNLSGTIPEFLAELPKLKVLNLRGNKLTGSIPKALKEISPATLQLRLKQKKLLHAIGDIGIPFNANGERRFSERDKTGHEIHIFGFESIVFASDNFSCTNKLGEGGFGPVYKGSLQDGRKIAIKRLSKYHNNRILLDWKTRLNIIQGIAQGLVYLHKYSRLKVIHRDLKPSNILLDHEMCPKVSDFGMARIFGLTDFEQENTNRVVGTYGYMSPEYALNGIVSIKTDVFSFGVLVLEIVSGRKNVSFYSYEDSLNLIGYAWKLWNEGRALELADPSLSGPWNADELLRCIIIGLLCVQDQAKDRPDMLHVISYLSNETISLAEPKQPAFFTNAAQNKATSPADIAENCSACNVTISDFNGR 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1512 442 SUPERFAMILY Protein kinase-like (PK-like) 160 429 IPR011009 -
Acco09g1512 442 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 211 - -
Acco09g1512 442 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 204 403 - -
Acco09g1512 442 SUPERFAMILY L domain-like 81 117 - -
Acco09g1512 442 SMART serkin_6 177 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1512 442 Gene3D Ribonuclease Inhibitor 28 132 IPR032675 -
Acco09g1512 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Acco09g1512 442 Pfam Protein kinase domain 217 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1512 442 Gene3D Transferase(Phosphotransferase) domain 1 210 411 - -
Acco09g1512 442 ProSiteProfiles Protein kinase domain profile. 98 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1512 442 Gene3D Transferase(Phosphotransferase) domain 1 165 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1512 Acco-ChrAcco09 31033670 31037379 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1512 165 419 Receptor kinase-like Gene Family AT4G23280 53.846 6.37e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco09g1512 Pkinase 4.2e-24 CL0016