Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco09g1506 ATGGATGACATCTATGATCGTACATGGCTTGTGGACAACATAACTTCTAAATTGCAAGATTGGAATGTGTTCAATAAGCCTGCGGAAATTGATCTTGAAAGCACAAATGATTCTTATAGATTACCAGCAGGAGTGCTACTATCTGCAGTCAAATCATCGAATCGCTCCTCTGCTTTGAACTTTGACTGTGGTTCTGTTTGGAGAAACTTAAGCTCGAGCAAGTTAAAAGGAGACATAGCTATTTCATTCTCACACCTTACGGAGTTGGAGTCCCTGGACTTGTCAGATAATCACTTATCAGGAACAATACCAGAATTTCTTGCTGAATTGCCAAAGTTGAGAGTTCTTTTGGATGGTAACCCTGATCTTTGCTTGACGGAGGATCCATGCAAAAAGCATAAGTTCGTTATTCCTCTAATAGCATCTGTTTCTGCTTTGATTGTTGTAATCTTGGTTACGCTTGGAATATGGATCCTTAGAATTAAAAGACAGAAAGAAACTGGTGCGAGGGCATTAGTTTATGAGTACATGGCTAATGGTGACCTCCGCCGACATTTATCCGGGTTAGAATACCTGCATAATGGTTGCAAGCCAGCAATAGTGCACAGAGACTTGAAGACCACCAACATTTTGCTAGATGAAAATATGGAAGCTAAGATTGCTGACTTTGGGTTGTCCAGAGCTTTTGCTAATGATATTGACAGTCATGTCTCAACTCGTCCTGCTGGAACAGTTGGTTATGTTGATCCTGAGTTTCAAAGTTCGGGAAACCTTACAAAAGGAAGTGACATATATAGTTTTGGAATAATTCTGCTAGAGCTAATCACTGGACAACCAGCAGCAAAAAGGCAACAAAACCATACCTTCAGTCTCCTACTTTATTGGGTTACCCCTAAATTTAAGAACAAGGAAATCGAATCCATAGTTGATCCAAGGTTACGAGGAAAATATAGTGTTGATTCGGTTTGGAAGTTTCTAGAGATAGCCATGTCATGCACTGCACCATCTGCAAGTGAAAGGCCTGATATAAGTCAAGTAGTTTATGAACTAAGGGGATGTTTGGCAATGGAGACAAGCTTGGAATTAGTGACCAGCAGCGATCTCCACCCCAGTTCGAGCAATTTCACAAATGTTAGTGCTTCACAATTTAATTCAGACTTCAGTGCTCTGTCTGGAAGATAG 1182 0.4052 MDDIYDRTWLVDNITSKLQDWNVFNKPAEIDLESTNDSYRLPAGVLLSAVKSSNRSSALNFDCGSVWRNLSSSKLKGDIAISFSHLTELESLDLSDNHLSGTIPEFLAELPKLRVLLDGNPDLCLTEDPCKKHKFVIPLIASVSALIVVILVTLGIWILRIKRQKETGARALVYEYMANGDLRRHLSGLEYLHNGCKPAIVHRDLKTTNILLDENMEAKIADFGLSRAFANDIDSHVSTRPAGTVGYVDPEFQSSGNLTKGSDIYSFGIILLELITGQPAAKRQQNHTFSLLLYWVTPKFKNKEIESIVDPRLRGKYSVDSVWKFLEIAMSCTAPSASERPDISQVVYELRGCLAMETSLELVTSSDLHPSSSNFTNVSASQFNSDFSALSGR 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco09g1506 393 PANTHER OS07G0107800 PROTEIN-RELATED 69 162 - -
Acco09g1506 393 SMART serkin_6 148 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1506 393 SUPERFAMILY L domain-like 69 126 - -
Acco09g1506 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Acco09g1506 393 ProSiteProfiles Protein kinase domain profile. 35 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1506 393 SUPERFAMILY Protein kinase-like (PK-like) 169 371 IPR011009 -
Acco09g1506 393 Gene3D Ribonuclease Inhibitor 12 134 IPR032675 -
Acco09g1506 393 Pfam Protein kinase domain 183 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco09g1506 393 ProSiteProfiles Leucine-rich repeat profile. 88 111 IPR001611 GO:0005515
Acco09g1506 393 Gene3D Transferase(Phosphotransferase) domain 1 177 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco09g1506 Acco-ChrAcco09 30871510 30876548 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco09g1506 171 359 Receptor kinase-like Gene Family AT1G51830 49.765 2.22e-62 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Acco09g1506 Pkinase 1.2e-25 CL0016